Receptor
PDB id Resolution Class Description Source Keywords
1O75 1.95 Å NON-ENZYME: IMMUNE TP47, THE 47-KILODALTON LIPOPROTEIN OF TREPONEMA PALLIDUM TREPONEMA PALLIDUM LIPOPROTEINULLNTIGEN PENICILLIN-BINDING PROTEIN INTEGRAL MEMBRANE LIPOPROTEIN IMMUNOGEN FOUR-DOMAIN PROTEIN ANTIGEN LIPOPROTEIN
Ref.: CRYSTAL STRUCTURE OF THE 47-KDA LIPOPROTEIN OF TREPONEMA PALLIDUM REVEALS A NOVEL PENICILLIN-BINDING PROTEIN J.BIOL.CHEM. V. 277 41857 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
PDX PDX A:1417;
Valid;
none;
submit data
658.517 n/a [S+2]...
XE A:1415;
A:1416;
B:1415;
B:1416;
B:1417;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
131.293 Xe [Xe]
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1O75 1.95 Å NON-ENZYME: IMMUNE TP47, THE 47-KILODALTON LIPOPROTEIN OF TREPONEMA PALLIDUM TREPONEMA PALLIDUM LIPOPROTEINULLNTIGEN PENICILLIN-BINDING PROTEIN INTEGRAL MEMBRANE LIPOPROTEIN IMMUNOGEN FOUR-DOMAIN PROTEIN ANTIGEN LIPOPROTEIN
Ref.: CRYSTAL STRUCTURE OF THE 47-KDA LIPOPROTEIN OF TREPONEMA PALLIDUM REVEALS A NOVEL PENICILLIN-BINDING PROTEIN J.BIOL.CHEM. V. 277 41857 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 199 families.
1 1O75 - PDX PDX n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 65 families.
1 1O75 - PDX PDX n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 43 families.
1 1O75 - PDX PDX n/a n/a
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: PDX PDX; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 PDX PDX 1 1
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1O75; Ligand: PDX PDX; Similar sites found: 7
This union binding pocket(no: 1) in the query (biounit: 1o75.bio1) has 14 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3GMB FAD 0.01045 0.43989 1.20482
2 2GVC FAD 0.03418 0.41093 1.68675
3 2QRK AMP 0.03546 0.415 1.77665
4 2YFT DQR 0.01537 0.40755 4.81928
5 5AYV KPL 0.03354 0.41345 6.14887
6 4BMO FMN 0.03377 0.40289 10.8696
7 1I7A FLC 0.001562 0.47263 15.3153
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