Receptor
PDB id Resolution Class Description Source Keywords
1NYT 1.5 Å EC: 1.1.1.25 SHIKIMATE DEHYDROGENASE AROE COMPLEXED WITH NADP+ ESCHERICHIA COLI ALPHA/BETA DOMAINS WIDE CLEFT SEPARATION OXIDOREDUCTASE
Ref.: STRUCTURES OF SHIKIMATE DEHYDROGENASE AROE AND ITS YDIB. A COMMON STRUCTURAL FRAMEWORK FOR DIFFERENT ACTIVITIES. J.BIOL.CHEM. V. 278 19463 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
DTV A:1405;
Invalid;
none;
submit data
154.251 C4 H10 O2 S2 C([C@...
NAP A:1401;
B:1411;
C:1421;
D:1431;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
743.405 C21 H28 N7 O17 P3 c1cc(...
SO4 A:1402;
A:1403;
A:1404;
A:1424;
B:1412;
B:1413;
B:1414;
B:1434;
C:1422;
C:1423;
C:1425;
C:1426;
D:1432;
D:1433;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1NYT 1.5 Å EC: 1.1.1.25 SHIKIMATE DEHYDROGENASE AROE COMPLEXED WITH NADP+ ESCHERICHIA COLI ALPHA/BETA DOMAINS WIDE CLEFT SEPARATION OXIDOREDUCTASE
Ref.: STRUCTURES OF SHIKIMATE DEHYDROGENASE AROE AND ITS YDIB. A COMMON STRUCTURAL FRAMEWORK FOR DIFFERENT ACTIVITIES. J.BIOL.CHEM. V. 278 19463 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 1NYT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 1NYT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
50% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 7 families.
1 1NYT - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
2 1P77 - ATR C10 H16 N5 O13 P3 c1nc(c2c(n....
3 2HK9 - NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
4 2D5C - SKM C7 H10 O5 C1[C@H]([C....
5 3DOO - SKM C7 H10 O5 C1[C@H]([C....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NAP; Similar ligands found: 127
No: Ligand ECFP6 Tc MDL keys Tc
1 NAP 1 1
2 NA0 0.881356 0.986301
3 TAP 0.872881 0.934211
4 NDO 0.840336 0.972603
5 NAD 0.811966 0.986111
6 N01 0.733871 0.958904
7 A3D 0.712 0.972603
8 NBP 0.707692 0.935065
9 NAD IBO 0.688 0.921053
10 NHD 0.68254 0.958904
11 NJP 0.661417 0.972973
12 NAJ PYZ 0.659091 0.898734
13 NFD 0.658915 0.934211
14 DND 0.619048 0.959459
15 NXX 0.619048 0.959459
16 ZID 0.605839 0.972603
17 NAQ 0.59854 0.922078
18 ATR 0.59292 0.917808
19 NAE 0.591241 0.946667
20 NDE 0.58042 0.986301
21 A22 0.571429 0.958904
22 AMP NAD 0.571429 0.933333
23 NAJ 0.567164 0.986111
24 A2R 0.563025 0.932432
25 NDC 0.561644 0.922078
26 NA7 0.552846 0.907895
27 ODP 0.551471 0.935065
28 A2P 0.539823 0.930556
29 8ID 0.537313 0.910256
30 NAD BBN 0.525974 0.865854
31 NPW 0.525547 0.8875
32 CNA 0.521739 0.959459
33 NZQ 0.521739 0.910256
34 NAD CJ3 0.519231 0.835294
35 NDP 0.514493 0.922078
36 PO4 PO4 A A A A PO4 0.503937 0.930556
37 DG1 0.503401 0.922078
38 1DG 0.503401 0.922078
39 NAD TDB 0.5 0.696078
40 TXP 0.5 0.922078
41 NMN AMP PO4 0.492958 0.921053
42 XNP 0.492958 0.875
43 25L 0.492308 0.958904
44 25A 0.492063 0.972222
45 NAD NDT 0.490909 0.747368
46 NMN 0.486726 0.888889
47 NGD 0.485714 0.935065
48 2AM 0.477876 0.891892
49 ADP 0.458333 0.945205
50 PAP 0.451613 0.931507
51 ADP MG 0.45082 0.906667
52 BEF ADP 0.447154 0.883117
53 ADP BEF 0.447154 0.883117
54 A2D 0.445378 0.945205
55 AN2 0.442623 0.932432
56 ADP PO3 0.44 0.944444
57 SAP 0.44 0.896104
58 AGS 0.44 0.896104
59 M33 0.439024 0.906667
60 AR6 AR6 0.438849 0.945205
61 BA3 0.438017 0.945205
62 ATP MG 0.436508 0.906667
63 ADP BMA 0.43609 0.92
64 OAD 0.43609 0.92
65 ATP 0.435484 0.945205
66 OOB 0.435115 0.958904
67 B4P 0.434426 0.945205
68 AP5 0.434426 0.945205
69 GAP 0.433071 0.92
70 0WD 0.432432 0.922078
71 5FA 0.432 0.945205
72 2A5 0.432 0.87013
73 AQP 0.432 0.945205
74 00A 0.428571 0.909091
75 CA0 0.427419 0.92
76 ALF ADP 0.426357 0.871795
77 ADP ALF 0.426357 0.871795
78 ACP 0.424 0.92
79 NAJ PZO 0.423841 0.897436
80 9SN 0.423358 0.897436
81 VO4 ADP 0.423077 0.932432
82 ANP MG 0.423077 0.896104
83 ADP VO4 0.423077 0.932432
84 WAQ 0.422222 0.884615
85 ACQ 0.421875 0.92
86 V3L 0.421875 0.945205
87 ADQ 0.421053 0.92
88 AR6 0.420635 0.918919
89 APR 0.420635 0.918919
90 ATP A A A 0.42029 0.958333
91 CO7 0.419753 0.786517
92 1ZZ 0.419118 0.841463
93 3OD 0.419118 0.92
94 DLL 0.41791 0.958904
95 AD9 0.417323 0.92
96 NAX 0.416667 0.875
97 OVE 0.416667 0.857143
98 MYR AMP 0.416058 0.841463
99 AV2 0.415385 0.868421
100 A3P 0.414634 0.944444
101 NNR 0.414414 0.72973
102 ALF ADP 3PG 0.413793 0.8625
103 OMR 0.413793 0.831325
104 LA8 ALF 3PG 0.413793 0.8625
105 ANP 0.410853 0.92
106 A1R 0.410448 0.860759
107 ABM 0.409836 0.893333
108 AMP 0.408333 0.944444
109 A 0.408333 0.944444
110 SON 0.408 0.933333
111 PPS 0.407692 0.829268
112 5AL 0.407692 0.932432
113 TYR AMP 0.407143 0.933333
114 NAI 0.406897 0.909091
115 7D3 0.406504 0.857143
116 DAL AMP 0.406015 0.932432
117 ADX 0.404762 0.829268
118 ATF 0.40458 0.907895
119 3UK 0.404412 0.945946
120 AMP DBH 0.404255 0.894737
121 139 0.402685 0.875
122 AMP MG 0.401639 0.893333
123 50T 0.401575 0.906667
124 SRP 0.401515 0.907895
125 A A 0.40146 0.972222
126 FA5 0.4 0.933333
127 3AM 0.4 0.90411
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1nyt.bio2) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1nyt.bio2) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1nyt.bio2) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: 632
This union binding pocket(no: 4) in the query (biounit: 1nyt.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 3KPE TM3 0.01852 0.40913 None
2 4JNA FAD 0.007557 0.40972 0.738007
3 3CIF NAD 0.000389 0.4471 1.10701
4 4E13 NAD 0.0001114 0.44523 1.10701
5 3CIF G3H 0.002675 0.42124 1.10701
6 1U8X NAD 0.003408 0.40077 1.10701
7 1U7T TDT 0.001843 0.4346 1.14943
8 1U7T NAD 0.001213 0.42577 1.14943
9 1E3W NAD 0.0009323 0.4099 1.14943
10 1E6W NAD 0.00093 0.41015 1.15385
11 4JK3 NAD 0.00001224 0.50348 1.1583
12 1PL6 572 0.000006219 0.52463 1.47601
13 1PL6 NAD 0.000003913 0.49946 1.47601
14 2F1K NAP 0.00006305 0.46677 1.47601
15 3MJE NDP 0.0003721 0.44942 1.47601
16 2RAB NAD 0.002797 0.44483 1.47601
17 2RAB FAD 0.001722 0.43885 1.47601
18 4AT0 FAD 0.002246 0.43672 1.47601
19 2YY7 NAD 0.001013 0.43332 1.47601
20 2V6G NAP 0.005193 0.40455 1.47601
21 3VZS NAP 0.002154 0.43472 1.55642
22 1J5P NAD 0.0002767 0.4514 1.58103
23 3ZPG 5GP 0.005407 0.45469 1.84502
24 1XHC FAD 0.001027 0.43959 1.84502
25 2CVQ NDP 0.0006291 0.43872 1.84502
26 1RYI FAD 0.00171 0.43597 1.84502
27 1YS4 NAP 0.0003281 0.4324 1.84502
28 2Z9V PXM 0.005837 0.42108 1.84502
29 1A5Z NAD 0.0008872 0.41652 1.84502
30 2Q0L FAD 0.006304 0.41211 1.84502
31 1PZG A3D 0.0001284 0.41009 1.84502
32 1VKO NAD 0.0008026 0.40385 1.84502
33 2RL1 UD1 0.0007594 0.40035 1.84502
34 1YOA FMN 0.003429 0.48412 1.88679
35 3RO7 TDR 0.000446 0.41067 1.88679
36 1YOA FAD 0.00131 0.40321 1.88679
37 2X61 CH 0.002104 0.40397 1.93798
38 2BRY FAD 0.0007108 0.44233 2.01207
39 4LTN NAI 0.004024 0.40242 2.03046
40 4FR3 LYS ARG ARG LYS SEP VAL 0.007922 0.40583 2.13675
41 2DFV NAD 0.0000222 0.49513 2.21402
42 1O6Z NAD 0.00003675 0.47816 2.21402
43 1T26 NAI 0.0001832 0.47792 2.21402
44 2A92 NAI 0.0001103 0.47386 2.21402
45 3KB6 NAD 0.0001045 0.46827 2.21402
46 1QO8 FAD 0.0008189 0.45049 2.21402
47 2DKH FAD 0.000625 0.44461 2.21402
48 1YB5 NAP 0.0008224 0.44106 2.21402
49 2DKH 3HB 0.001318 0.43856 2.21402
50 1RSG FAD 0.001824 0.43581 2.21402
51 1V59 FAD 0.002152 0.43569 2.21402
52 3NUG NAD 0.0009267 0.43488 2.21402
53 3GMB FAD 0.001225 0.43395 2.21402
54 1T26 GBD 0.00327 0.42993 2.21402
55 4DPL NAP 0.0002414 0.42922 2.21402
56 1OC2 NAD 0.004888 0.42782 2.21402
57 2GLX NDP 0.001111 0.42033 2.21402
58 2QZZ NAP 0.003333 0.41957 2.21402
59 2QZZ EMF 0.004196 0.41649 2.21402
60 1N4W FAD 0.006014 0.41485 2.21402
61 3NGL NAP 0.001008 0.41315 2.21402
62 1E7S NAP 0.005462 0.40491 2.21402
63 2J07 HDF 0.004149 0.40282 2.21402
64 2J07 FAD 0.004149 0.40282 2.21402
65 3V91 UPG 0.003969 0.40262 2.21402
66 1K97 CIR 0.0141 0.40178 2.21402
67 1K97 ASP 0.0141 0.40178 2.21402
68 3OIG NAD 0.005192 0.40053 2.25564
69 2Y6Q I7T 0.004467 0.42305 2.26131
70 2Y6Q FAD 0.001959 0.42305 2.26131
71 4OSP NAP 0.003508 0.40876 2.28137
72 2JGS BTN 0.01193 0.41015 2.30769
73 3OJF IMJ 0.01107 0.40179 2.33463
74 3OJF NDP 0.008045 0.40151 2.33463
75 4FN4 NAD 0.0002341 0.45754 2.3622
76 3SJ7 NDP 0.001059 0.42965 2.38095
77 2EWM NAD 0.002401 0.41814 2.40964
78 2BKX F6R 0.01803 0.40155 2.47934
79 4F8L GAL 0.0003834 0.53764 2.58303
80 4E5N NAD 0.0001729 0.46441 2.58303
81 3OJO NAD 0.0001383 0.45041 2.58303
82 4FWE FAD 0.001194 0.44461 2.58303
83 4L8V NAP 0.0004982 0.44431 2.58303
84 1CF2 NAP 0.00039 0.44378 2.58303
85 4AP3 NAP 0.002856 0.44099 2.58303
86 3GD4 NAD 0.004701 0.43905 2.58303
87 3GD4 FAD 0.002928 0.43905 2.58303
88 1H6C NDP 0.00146 0.43446 2.58303
89 4MIG G3F 0.002697 0.4342 2.58303
90 4EMI NAD 0.004707 0.43142 2.58303
91 1H6C SIN 0.001957 0.43139 2.58303
92 1WDA BAG 0.00273 0.42981 2.58303
93 1U1I NAD 0.001645 0.42871 2.58303
94 2YG3 FAD 0.00245 0.42837 2.58303
95 3FPZ AHZ 0.003162 0.42414 2.58303
96 3WE0 FAD 0.004948 0.41845 2.58303
97 2WET FAD 0.004565 0.41802 2.58303
98 1HKU NAD 0.0003613 0.41755 2.58303
99 3P3N AKG 0.01228 0.41736 2.58303
100 3FG2 FAD 0.002994 0.41681 2.58303
101 2YYY NAP 0.002737 0.41309 2.58303
102 1W6U NAP 0.001827 0.41253 2.58303
103 4B4U NAP 0.00381 0.41129 2.58303
104 1BDB NAD 0.0004464 0.40973 2.58303
105 4EMI FAD 0.006754 0.40787 2.58303
106 3QV1 NAD 0.003707 0.4078 2.58303
107 2WA4 069 0.008796 0.40009 2.58303
108 2NXW TPP 0.001083 0.4047 2.65487
109 2Q2V NAD 0.007292 0.40099 2.7451
110 4W6Z 8ID 0.0000119 0.51959 2.95203
111 1I0Z NAI 0.00003834 0.4892 2.95203
112 2NCD ADP 0.0004689 0.47491 2.95203
113 1LDM NAD 0.00001889 0.46805 2.95203
114 1KOL NAD 0.0002322 0.46628 2.95203
115 2QRK AMP 0.0002789 0.46553 2.95203
116 1YKJ FAD 0.002267 0.44684 2.95203
117 3B1J NAD 0.0005192 0.44359 2.95203
118 1CER NAD 0.0004074 0.43594 2.95203
119 1LUA NAP 0.000278 0.43191 2.95203
120 1KNR FAD 0.002119 0.43102 2.95203
121 4NTC FAD 0.00243 0.42955 2.95203
122 3H9E NAD 0.0009989 0.42756 2.95203
123 3LXD FAD 0.001917 0.42721 2.95203
124 3B20 NAD 0.0007616 0.42687 2.95203
125 3EAU NDP 0.00271 0.42654 2.95203
126 3EAU PDN 0.00271 0.42654 2.95203
127 1HDG NAD 0.00106 0.4249 2.95203
128 3LZW FAD 0.002659 0.42475 2.95203
129 1YKF NAP 0.001528 0.42469 2.95203
130 3LZW NAP 0.006726 0.4232 2.95203
131 1EK6 UPG 0.007505 0.41968 2.95203
132 3ZV6 NAD 0.004422 0.4186 2.95203
133 3ZV6 4HB 0.004662 0.4186 2.95203
134 1T8U UAP SGN IDS SGN 0.0006918 0.41845 2.95203
135 4TM3 FAD 0.01408 0.4147 2.95203
136 2D2I NAP 0.00186 0.4121 2.95203
137 2Q1W NAD 0.003741 0.41161 2.95203
138 1AE1 NAP 0.004279 0.41047 2.95203
139 3A1I UNU 0.006442 0.40972 2.95203
140 1Z6Z NAP 0.003759 0.40892 2.95203
141 3QVP FAD 0.008771 0.40789 2.95203
142 3F8D FAD 0.02279 0.40638 2.95203
143 4JJF N2I 0.004545 0.40559 2.95203
144 4JJF FE9 0.00388 0.40559 2.95203
145 4AF0 IMP 0.003909 0.40284 2.95203
146 2CUL FAD 0.001325 0.43381 3.01724
147 1G8S MET 0.001086 0.46568 3.04348
148 1DAK DPU 0.001477 0.41003 3.125
149 1DAK ADP 0.001477 0.41003 3.125
150 2CFC NAD 0.001964 0.41888 3.2
151 4BVA NDP 0.0000004774 0.56799 3.32103
152 1V8B NAD 0.000001917 0.55235 3.32103
153 4BVA T3 0.000005012 0.53817 3.32103
154 1D1T NAD 0.000007616 0.52106 3.32103
155 1GUZ NAD 0.000008929 0.51284 3.32103
156 1GV0 NAD 0.00001356 0.50739 3.32103
157 1LTH NAD 0.00001105 0.49831 3.32103
158 1SOW NAD 0.00005319 0.48674 3.32103
159 1GR0 NAD 0.0001267 0.47436 3.32103
160 1GQ2 NAP 0.00001978 0.47417 3.32103
161 4IDC 1XX 0.0002557 0.46046 3.32103
162 4FC7 NAP 0.00063 0.4553 3.32103
163 3CGD NAD 0.003008 0.44956 3.32103
164 4R5M 4NO 0.0004069 0.44936 3.32103
165 2F2U M77 0.0006681 0.44934 3.32103
166 4R5M NAP 0.0003638 0.44826 3.32103
167 3CGB FAD 0.0008358 0.44451 3.32103
168 2PV7 NAD 0.0005541 0.43936 3.32103
169 3G5S FAD 0.001567 0.43318 3.32103
170 2ZB4 NAP 0.002662 0.42363 3.32103
171 2ZB4 5OP 0.002829 0.42363 3.32103
172 1Q0H NDP 0.005983 0.41847 3.32103
173 1Q0H FOM 0.005452 0.41847 3.32103
174 2C29 NAP 0.004985 0.41831 3.32103
175 4Q9N NAI 0.00266 0.41634 3.32103
176 1TB4 PEJ 0.0008026 0.41108 3.32103
177 1SB8 NAD 0.009192 0.41046 3.32103
178 1SB8 UD2 0.01086 0.41046 3.32103
179 2B4Q NAP 0.004037 0.40767 3.32103
180 3ITJ FAD 0.01154 0.407 3.32103
181 2ZB3 NDP 0.003935 0.40676 3.32103
182 2C29 DQH 0.01115 0.40347 3.32103
183 3WMX NAD 0.00335 0.40076 3.32103
184 2GDZ NAD 0.0007912 0.43622 3.37079
185 2AG8 NAP 0.0005376 0.41781 3.42205
186 4C0X AQN 0.001244 0.40145 3.44828
187 4Q0P 0MK 0.01893 0.40177 3.46154
188 3A2Y TS5 0.00111 0.42125 3.5533
189 4MDB RLT 0.005352 0.44364 3.55556
190 4GKV NAD 0.00000663 0.52689 3.57143
191 4MP8 NAD 0.000004359 0.53917 3.69004
192 1O9U ADZ 0.0006725 0.50121 3.69004
193 1PJS NAD 0.000001145 0.49111 3.69004
194 1X7D NAD 0.0000353 0.4889 3.69004
195 1X7D ORN 0.00007357 0.48828 3.69004
196 4MP8 MLI 0.000004938 0.48606 3.69004
197 1YJQ NAP 0.00008384 0.48023 3.69004
198 1EBF NAD 0.0000519 0.47221 3.69004
199 1GTE FAD 0.001361 0.45517 3.69004
200 1F06 NDP 0.0003832 0.45466 3.69004
201 1UWK URO 0.0007985 0.45403 3.69004
202 3JV7 NAD 0.0000494 0.45327 3.69004
203 2C7G FAD 0.001591 0.4491 3.69004
204 2C7G ODP 0.001529 0.44905 3.69004
205 2GSD NAD 0.0006897 0.44549 3.69004
206 1Y8Q ATP 0.0004065 0.44492 3.69004
207 1E1M NAP 0.002017 0.44301 3.69004
208 1DSS NAD 0.0004225 0.44069 3.69004
209 1X87 NAD 0.0002779 0.44003 3.69004
210 4CS4 AXZ 0.0002928 0.43627 3.69004
211 1K3T BRZ 0.001534 0.42869 3.69004
212 4E28 9MZ 0.00754 0.42711 3.69004
213 4O1M NAD 0.002818 0.41397 3.69004
214 2J8Z NAP 0.003592 0.40835 3.69004
215 1ORR NAD 0.004905 0.40804 3.69004
216 3IAE D7K 0.0008157 0.40715 3.69004
217 4K5S FAD 0.005807 0.40504 3.69004
218 4K5S PM0 0.01282 0.40504 3.69004
219 2RHQ GAX 0.001376 0.40252 3.69004
220 1I8T FAD 0.01044 0.40095 3.69004
221 3QWI NAP 0.00124 0.43113 3.7037
222 3QWI CUE 0.002228 0.43113 3.7037
223 1IY8 NAD 0.001288 0.4291 3.74532
224 4NBT NAD 0.001454 0.42412 3.75
225 1H5Q NAP 0.001158 0.43096 3.77358
226 2DC1 NAD 0.00009266 0.47036 3.81356
227 1NFQ NAI 0.002833 0.41653 3.84615
228 1OAA OAA 0.0009786 0.44826 3.861
229 1B74 DGN 0.02003 0.41962 3.93701
230 4IXW IXW 0.00671 0.41359 3.93701
231 2B4R NAD 0.001011 0.43336 4.05797
232 2B4R AES 0.00189 0.42097 4.05797
233 3OND NAD 0.000007334 0.54318 4.05904
234 3OND ADN 0.000003328 0.50538 4.05904
235 4OPC PGT 0.002182 0.46708 4.05904
236 2QV7 ADP 0.0001286 0.46019 4.05904
237 1WP4 NDP 0.0001679 0.46006 4.05904
238 4D04 NAP 0.002602 0.44419 4.05904
239 2RGJ FAD 0.0006767 0.4432 4.05904
240 2NAD NAD 0.0008164 0.44247 4.05904
241 1Z44 NPO 0.01956 0.44144 4.05904
242 2CVZ NDP 0.0004756 0.44036 4.05904
243 3KLJ FAD 0.0009262 0.43763 4.05904
244 4PIV NDP 0.001391 0.42774 4.05904
245 1R6D NAD 0.005995 0.42245 4.05904
246 1R6D DAU 0.005754 0.42245 4.05904
247 3L9W AMP 0.002197 0.4197 4.05904
248 4EDF UPG 0.005775 0.41913 4.05904
249 3L9W GSH 0.005696 0.4003 4.05904
250 2BLE 5GP 0.003974 0.41045 4.08719
251 4J4H 1J1 0.0000366 0.50865 4.2471
252 4J4H NAI 0.0000605 0.50285 4.2471
253 1HYH NAD 0.00002998 0.49521 4.42804
254 4PLG NAI 0.00009066 0.48451 4.42804
255 2CDC XYS 0.0003716 0.4831 4.42804
256 2CDC XYP 0.0003855 0.48239 4.42804
257 1MV8 NAD 0.00006673 0.47423 4.42804
258 2VYN NAD 0.0001284 0.4664 4.42804
259 1DRV A3D 0.000047 0.46472 4.42804
260 3MAG 3MA 0.005424 0.46319 4.42804
261 3A06 NDP 0.0004449 0.452 4.42804
262 3A06 FOM 0.0005145 0.452 4.42804
263 1D4D FAD 0.0009586 0.44864 4.42804
264 2GCG NDP 0.0004181 0.44584 4.42804
265 1MUU NAD 0.0003154 0.44571 4.42804
266 3E1T FAD 0.001539 0.43994 4.42804
267 1PEA ACM 0.007872 0.43895 4.42804
268 1LVL NAD 0.001141 0.43741 4.42804
269 3UOY NAP 0.004616 0.43578 4.42804
270 2NU8 COA 0.000638 0.4353 4.42804
271 1GAD NAD 0.0007083 0.43349 4.42804
272 4J36 1HR 0.002809 0.42887 4.42804
273 4J36 FAD 0.001658 0.42731 4.42804
274 3L4S 3PG 0.002239 0.42197 4.42804
275 3L4S NAD 0.002082 0.42197 4.42804
276 2R0N FAD 0.006719 0.41343 4.42804
277 4C3Y FAD 0.007358 0.40927 4.42804
278 4PLG OXM 0.001346 0.40799 4.42804
279 3MAG SAH 0.001731 0.40646 4.42804
280 2C5S AMP 0.01044 0.40559 4.42804
281 1C3V NDP 0.0005412 0.44434 4.4898
282 2DTX BMA 0.003451 0.42109 4.54545
283 4RQU NAD 0.000009209 0.5123 4.79705
284 3TWO NDP 0.0000239 0.50559 4.79705
285 1P0F NAP 0.0000672 0.48261 4.79705
286 2HJR APR 0.00009242 0.475 4.79705
287 1BW9 NAD 0.0001494 0.47066 4.79705
288 4O0L NDP 0.0002668 0.45678 4.79705
289 1C1X NAD 0.0002036 0.44734 4.79705
290 1BXG NAD 0.0004668 0.44068 4.79705
291 3V1Y NAD 0.0005669 0.43733 4.79705
292 3ZNN 4WL 0.003412 0.4354 4.79705
293 3CIP ATP 0.0006293 0.42428 4.79705
294 2AQJ TRP 0.01123 0.4134 4.79705
295 2AQJ FAD 0.01164 0.4134 4.79705
296 3KO8 NAD 0.004524 0.40825 4.79705
297 4BJZ P3A 0.02195 0.40712 4.79705
298 4BJZ FAD 0.009829 0.40309 4.79705
299 1Z82 NDP 0.002266 0.40307 4.79705
300 2NLI LAC 0.004933 0.40113 4.79705
301 2NLI FMN 0.004933 0.40113 4.79705
302 1VM6 NAD 0.0002961 0.44679 4.82456
303 1U7Z PMT 0.0004087 0.41933 4.86726
304 3VHZ L2P GLC MAN SGA 0.006895 0.40644 4.96183
305 2AE2 PTO 0.00002079 0.4702 5
306 2AE2 NAP 0.002684 0.42671 5
307 2VOH CIT 0.00745 0.44561 5.09554
308 3NYQ MCA 0.001477 0.40048 5.14851
309 3NYQ AMP 0.001627 0.40048 5.14851
310 1LLU NAD 0.00001304 0.51485 5.16605
311 1OMO NAD 0.000006911 0.50628 5.16605
312 1CDO NAD 0.00002832 0.48901 5.16605
313 1DXY NAD 0.00008954 0.46916 5.16605
314 2FR1 NDP 0.0003028 0.45603 5.16605
315 2I3G NAP 0.00003749 0.4512 5.16605
316 2CDU FAD 0.002039 0.42729 5.16605
317 1B8U OAA 0.001845 0.4241 5.16605
318 1B8U NAD 0.0004476 0.42322 5.16605
319 2CDU ADP 0.000276 0.41256 5.16605
320 3NTD FAD 0.006372 0.40892 5.16605
321 2NVK FAD 0.007896 0.40798 5.16605
322 1SS4 GSH 0.0006586 0.53464 5.22876
323 1VL8 NAP 0.000325 0.41489 5.24345
324 3RFV NAI 0.003343 0.40818 5.24345
325 1HDO NAP 0.002998 0.41801 5.33981
326 3A28 NAD 0.0006387 0.41684 5.42636
327 1E6E FAD 0.0008169 0.44371 5.46875
328 1H8P PC 0.00491 0.46044 5.50459
329 3HAD NAD 0.0008177 0.45646 5.53506
330 3NYC FAD 0.001033 0.45389 5.53506
331 2YVJ FAD 0.0007279 0.447 5.53506
332 1REO FAD 0.0008449 0.44664 5.53506
333 3B1F NAD 0.0001382 0.44639 5.53506
334 2F5Z FAD 0.001486 0.44059 5.53506
335 2YVF FAD 0.003494 0.43713 5.53506
336 2YVF NAD 0.003625 0.43713 5.53506
337 4CNK FAD 0.002068 0.4293 5.53506
338 4TSK NDP 0.0009672 0.42812 5.53506
339 4COQ SAN 0.007415 0.42744 5.53506
340 1RM4 NDP 0.00113 0.427 5.53506
341 3OZ2 FAD 0.003419 0.4223 5.53506
342 1ZMD NAI 0.001799 0.41583 5.53506
343 3E8N VRA 0.001472 0.41218 5.53506
344 3E8N ATP 0.001472 0.41218 5.53506
345 2YVJ NAI 0.0006994 0.40461 5.53506
346 1HV9 COA 0.003635 0.40389 5.53506
347 1XHL NDP 0.006391 0.40213 5.53506
348 1NC4 DOF 0.02593 0.40849 5.5814
349 4NAT ADP 0.01308 0.40295 5.625
350 3BY8 MLT 0.0008754 0.47764 5.6338
351 3AIH BMA MAN MAN 0.0124 0.42815 5.64516
352 2IYG FMN 0.002549 0.42114 5.64516
353 1LSS NAD 0.00008897 0.44805 5.71429
354 1GEE NAD 0.001642 0.40001 5.74713
355 1YRX FMN 0.005939 0.40266 5.78512
356 1EXB NDP 0.0004172 0.45174 5.82524
357 1U3U BNF 0.00003187 0.50997 5.90406
358 1I2B USQ 0.000007277 0.50079 5.90406
359 1I2B UPG 0.000007277 0.50079 5.90406
360 1I2B NAD 0.003689 0.4324 5.90406
361 1GET NAP 0.006412 0.43002 5.90406
362 1GET FAD 0.008986 0.42224 5.90406
363 2HQM FAD 0.005039 0.41717 5.90406
364 4J1Q NDP 0.002845 0.41098 5.90406
365 4HA6 FAD 0.009373 0.40667 5.90406
366 3K37 BCZ 0.01247 0.40268 5.90406
367 1QXA GLY GLY GLY 0.03286 0.41104 5.95745
368 3ORF NAD 0.001851 0.41991 5.9761
369 2RH4 EMO 0.00214 0.43579 6.13718
370 4EUE NAI 0.003925 0.41076 6.2201
371 1BGQ RDC 0.0003945 0.41063 6.22222
372 1SC6 NAD 0.00003718 0.49306 6.27306
373 1PS9 FAD 0.001099 0.44405 6.27306
374 3SQP FAD 0.01536 0.44083 6.27306
375 1WMA AB3 0.001941 0.43567 6.27306
376 1KYQ NAD 0.00006106 0.43377 6.27306
377 1DJN ADP 0.0004063 0.43229 6.27306
378 3ULK NDP 0.00003026 0.43068 6.27306
379 3O26 NDP 0.001154 0.42961 6.27306
380 2BGM NAJ 0.001017 0.42726 6.27306
381 1PS9 NAP 0.001134 0.42537 6.27306
382 2VVM FAD 0.00301 0.42462 6.27306
383 2VVL FAD 0.003417 0.42332 6.27306
384 1GY8 NAD 0.003526 0.41137 6.27306
385 1V35 NAI 0.006935 0.41036 6.27306
386 3SJU NDP 0.0007362 0.40897 6.27306
387 1YBH FAD 0.001571 0.40808 6.27306
388 3I28 34N 0.002653 0.40757 6.27306
389 3IU9 T07 0.005941 0.40371 6.27306
390 4HXY NDP 0.0003518 0.45191 6.39269
391 1N9L FMN 0.0007117 0.42379 6.42202
392 4CQM NAP 0.0002627 0.45552 6.55738
393 1C1L GAL BGC 0.00364 0.44824 6.56934
394 3AFN NAP 0.002116 0.42297 6.58915
395 1NVV GNP 0.005063 0.4039 6.62651
396 1NVU GTP 0.006386 0.40045 6.62651
397 2BH9 NAP 0.001258 0.45186 6.64207
398 3WGT QSC 0.00222 0.43783 6.64207
399 3WGT FAD 0.002247 0.43672 6.64207
400 1NM5 NAD 0.005543 0.42315 6.64207
401 3S5W FAD 0.001968 0.42164 6.64207
402 4KQI NIO 0.0003064 0.42036 6.64207
403 4KQI RBZ 0.0003064 0.42036 6.64207
404 1NM5 NAP 0.01327 0.40593 6.64207
405 4B7X NAP 0.0006008 0.40309 6.64207
406 4OYA 1VE 0.0229 0.40039 6.64207
407 3ICC NAP 0.004821 0.40712 6.66667
408 4ITU NAI 0.0004641 0.44989 6.69145
409 4ITU 1HS 0.001161 0.4441 6.69145
410 3RJ5 NAD 0.0006051 0.45153 6.69291
411 1XCL SAH 0.004659 0.40773 6.80851
412 1M5B BN1 0.002869 0.41385 6.84411
413 1FIQ SAL 0.0004425 0.41684 6.84932
414 1FIQ MTE 0.000552 0.41094 6.84932
415 2V5E SCR 0.006445 0.45916 6.93069
416 2HMT NAI 0.0001141 0.44977 6.94444
417 2GZ3 NAP 0.0001544 0.48755 7.01107
418 3GFB NAD 0.00002638 0.47565 7.01107
419 1DIG L37 0.0002639 0.4599 7.01107
420 1DIG NAP 0.0002651 0.45838 7.01107
421 1H82 GZZ 0.001823 0.4503 7.01107
422 4KQW NAP 0.0004903 0.45027 7.01107
423 2V3A FAD 0.0006993 0.44891 7.01107
424 2V3B FAD 0.000681 0.44819 7.01107
425 1N5D NDP 0.0005867 0.44293 7.01107
426 4TQG NDP 0.0006568 0.43797 7.01107
427 1H82 FAD 0.004585 0.42978 7.01107
428 1NAA ABL 0.006215 0.42177 7.01107
429 1NAA 6FA 0.004132 0.42177 7.01107
430 3PLN U5P 0.007007 0.41768 7.01107
431 3HDY FAD 0.01341 0.41198 7.01107
432 3HDY GDU 0.01594 0.40928 7.01107
433 3HDY FDA 0.01543 0.40928 7.01107
434 1MXH NAP 0.008087 0.4046 7.01107
435 1MXH DHF 0.008633 0.40341 7.01107
436 4J56 FAD 0.008538 0.40928 7.01754
437 2DKN NAI 0.001131 0.4285 7.05882
438 1I36 NAP 0.0002458 0.44058 7.19697
439 3WLE NAD 0.00005065 0.4936 7.33138
440 1O0S NAI 0.00000494 0.50647 7.38007
441 3FWN ATR 0.0001605 0.47015 7.38007
442 1J49 NAD 0.0001096 0.46917 7.38007
443 1MO9 KPC 0.00485 0.44123 7.38007
444 1MO9 FAD 0.006085 0.43621 7.38007
445 3SHR CMP 0.00374 0.41924 7.38007
446 2Z3Y F2N 0.004761 0.41916 7.38007
447 1VQW FAD 0.002657 0.41893 7.38007
448 2GVC FAD 0.003278 0.4152 7.38007
449 2GV8 FAD 0.003865 0.41348 7.38007
450 3ICR FAD 0.005645 0.41006 7.38007
451 3ICS FAD 0.006194 0.40943 7.38007
452 3ICT FAD 0.006643 0.40712 7.38007
453 3ICT ADP 0.000146 0.40323 7.38007
454 1NNU NAD 0.00005259 0.4894 7.42358
455 1NNU TCT 0.00005259 0.4894 7.42358
456 2GJN FMN 0.0007345 0.40079 7.62195
457 1ZEM NAD 0.001494 0.42062 7.63359
458 2JAH NDP 0.003768 0.4102 7.69231
459 1F8F NAD 0.00007923 0.46941 7.74908
460 2E5V FAD 0.0009059 0.44968 7.74908
461 4OOE NDP 0.0004839 0.43375 7.74908
462 1JNR FAD 0.007252 0.43054 7.74908
463 3ETG GTP 0.002883 0.42934 7.74908
464 3ETG GLU 0.004442 0.42811 7.74908
465 2X3N FAD 0.003921 0.41664 7.74908
466 3U4C NDP 0.003222 0.41025 7.74908
467 1VL0 NAI 0.002809 0.40817 7.74908
468 2B5W NAP 0.0004265 0.40165 7.74908
469 1W8D NAP 0.001672 0.41377 7.94702
470 1W73 NAP 0.001907 0.41154 7.94702
471 2GAG NAD 0.0009679 0.44186 8.08081
472 2GAG FAD 0.003505 0.42666 8.08081
473 2GAG FOA 0.003604 0.42614 8.08081
474 1G0N PHH 0.0006847 0.45269 8.11808
475 1G0N NDP 0.0006287 0.45083 8.11808
476 1PN0 FAD 0.001292 0.44702 8.11808
477 1PN0 IPH 0.001356 0.44702 8.11808
478 1RP0 AHZ 0.0007487 0.44004 8.11808
479 4NTD FAD 0.00193 0.43055 8.11808
480 3IHG FAD 0.00137 0.42516 8.11808
481 2B9W FAD 0.007759 0.41904 8.11808
482 1N1G BCP 0.005314 0.40895 8.11808
483 2BJK NAD 0.004864 0.40334 8.11808
484 3TN7 NJP 0.003342 0.41232 8.17121
485 1O94 ADP 0.0003994 0.4372 8.33333
486 2ZAT NAP 0.001516 0.42484 8.46154
487 3S9K CIT 0.002118 0.49709 8.47458
488 1QMG APX 0.0001533 0.466 8.48709
489 3WBF API 0.0003203 0.45647 8.48709
490 3WBF NAP 0.0002294 0.4563 8.48709
491 4USQ FAD 0.002757 0.41951 8.48709
492 1FL2 FAD 0.004364 0.41683 8.48709
493 1FEC FAD 0.006532 0.41599 8.48709
494 1JAY NAP 0.0000539 0.46303 8.49057
495 1HDR NAD 0.003639 0.4286 8.60656
496 2WSB NAD 0.0003662 0.46298 8.66142
497 1V6A TRE 0.0002188 0.52028 8.73494
498 1UXG NAD 0.00002286 0.51074 8.73786
499 1UXG FUM 0.0000599 0.45267 8.73786
500 1T57 FMN 0.00008126 0.41949 8.73786
501 3CMC NAD 0.002471 0.44723 8.85609
502 1BZL FAD 0.00934 0.43402 8.85609
503 3FC4 EDO 0.001253 0.42376 8.85609
504 4MDH NAD 0.001385 0.41126 8.85609
505 5MDH NAD 0.002852 0.41094 8.85609
506 1PR9 NAP 0.0006656 0.44349 9.01639
507 3D3W NAP 0.0009644 0.43418 9.01639
508 3BAZ NAP 0.0001446 0.45909 9.22509
509 2XVF FAD 0.001224 0.43764 9.22509
510 2XVE FAD 0.003711 0.43597 9.22509
511 1BXK NAD 0.001881 0.41964 9.22509
512 2IZ1 ATR 0.002957 0.41577 9.22509
513 1B7Y FYA 0.0004505 0.40718 9.22509
514 3FSY SCA 0.002 0.4019 9.22509
515 2E1A MSE 0.00139 0.44198 9.33333
516 1FK8 NAD 0.003046 0.40678 9.33852
517 3ZOD FMN 0.0005173 0.40707 9.42408
518 3ZOD HQE 0.0005173 0.40707 9.42408
519 2BNE U5P 0.001243 0.4048 9.54357
520 1ZH8 NAP 0.0001808 0.45877 9.5941
521 3CH6 311 0.002151 0.44713 9.5941
522 4M52 FAD 0.004573 0.41895 9.5941
523 2Q1S NAI 0.008837 0.40776 9.5941
524 3F3E LEU 0.00195 0.40282 9.5941
525 1JQI FAD 0.001904 0.402 9.5941
526 3V1U NAD 0.004179 0.40135 9.5941
527 4II2 ATP 0.001165 0.40826 9.81595
528 1JA9 NDP 0.001172 0.43213 9.85401
529 2DT5 NAD 0.00002699 0.46855 9.95261
530 1LDN NAD 0.00003638 0.49181 9.9631
531 1NVM NAD 0.0002671 0.45676 9.9631
532 3UCL CYH 0.004577 0.43466 9.9631
533 3UCL NAP 0.005051 0.43466 9.9631
534 1XSE NDP 0.002977 0.42482 9.9631
535 1ZBQ NAD 0.002083 0.42197 9.9631
536 4K26 SFF 0.004187 0.41758 9.9631
537 4K26 NDP 0.002511 0.41735 9.9631
538 3A4V NAD 0.00437 0.41358 9.9631
539 3AD8 NAD 0.0007931 0.4417 10.101
540 3AD8 FAD 0.009279 0.42161 10.101
541 2O4C NAD 0.0001323 0.46912 10.3321
542 2WPF WPF 0.009367 0.43485 10.3321
543 1PGP 6PG 0.001494 0.43287 10.3321
544 2WPF FAD 0.01059 0.43105 10.3321
545 2Q37 3AL 0.0008722 0.46299 10.4972
546 2VHW NAI 0.00001882 0.51136 10.7011
547 1HYE NAP 0.0008433 0.42189 10.7011
548 1EDO NAP 0.001546 0.42724 11.0656
549 1UDB UFG 0.00002334 0.48043 11.0701
550 2DBZ NAP 0.0001582 0.46277 11.0701
551 1RZM PEP 0.003615 0.43001 11.0701
552 1RZM E4P 0.01356 0.42103 11.0701
553 1UDB NAD 0.006615 0.41904 11.0701
554 1OBB NAD 0.00196 0.41121 11.0701
555 2PZM NAD 0.009142 0.40713 11.0701
556 1QG6 NAD 0.01297 0.40066 11.1111
557 1E3I CXF 0.00002189 0.43502 11.4391
558 1TIW TFB 0.0002927 0.43048 11.4391
559 1TIW FAD 0.0002927 0.43048 11.4391
560 4O8A FAD 0.000311 0.42016 11.4391
561 3LAD FAD 0.00617 0.41345 11.4391
562 4USR FAD 0.004339 0.41022 11.4391
563 4GLL NAD 0.006892 0.4008 11.4391
564 4QED NAP 0.001589 0.42401 11.6935
565 9LDB NAD 0.00002944 0.49553 11.8081
566 9LDT NAD 0.0000319 0.49412 11.8081
567 1EZ4 NAD 0.0000439 0.47306 11.8081
568 1WDK NAD 0.00006699 0.46307 11.8081
569 1C0I BE2 0.0003241 0.43694 11.8081
570 1C0I FAD 0.0003241 0.43694 11.8081
571 1KEV NDP 0.001299 0.43291 11.8081
572 3JYN NDP 0.002914 0.41729 11.8081
573 1XKQ NDP 0.006751 0.40236 11.8081
574 4F4S EFO 0.0005344 0.46556 11.8421
575 2Q46 NAP 0.005698 0.4003 11.8577
576 3AY6 NAI 0.004256 0.41516 11.8959
577 3AY6 BGC 0.008113 0.41441 11.8959
578 3F81 STT 0.001136 0.48952 12.0219
579 3HAZ NAD 0.0003164 0.41841 12.1771
580 2RGH FAD 0.004367 0.41783 12.1771
581 1UP7 NAD 0.003218 0.40584 12.1771
582 2AG5 NAD 0.003943 0.40808 12.1951
583 3W9K MYR 0.01609 0.40392 12.2302
584 1E5Q NDP 0.00004411 0.48501 12.5461
585 4G74 FAD 0.001746 0.43007 12.5461
586 4G74 UQ5 0.003227 0.42997 12.5461
587 2RGO FAD 0.003543 0.41847 12.5461
588 3OID NDP 0.002932 0.41718 12.7907
589 3CTY FAD 0.0002899 0.4717 12.9151
590 3ABI NAD 0.0000355 0.46191 12.9151
591 3AYI FAD 0.003252 0.4332 12.9151
592 3AYI HCI 0.003393 0.4332 12.9151
593 2Q7V FAD 0.00202 0.43293 12.9151
594 1YQD NAP 0.00001322 0.45625 13.1148
595 1TDF NAP 0.0151 0.41447 13.2841
596 1TDF FAD 0.007547 0.4133 13.2841
597 1EP2 ORO 0.00109 0.40724 13.2841
598 1SAY PYR 0.00004003 0.49488 13.2964
599 3TCT 3MI 0.004557 0.4039 13.3858
600 3H8V ATP 0.00008063 0.43794 13.6531
601 3O03 NAP 0.003687 0.40502 13.6531
602 3RNM FAD 0.001652 0.43864 13.7931
603 1FS5 TLA 0.01006 0.40997 13.9098
604 3VPH OXM 0.00002308 0.50621 14.0221
605 3VPH NAD 0.00006829 0.48387 14.0221
606 3GGO NAI 0.0002056 0.47467 14.0221
607 2G5C NAD 0.0002722 0.4549 14.0221
608 4GUS FAD 0.001099 0.44713 14.5161
609 4GUT FAD 0.001332 0.44551 14.5161
610 4HSU FAD 0.001394 0.44275 14.5161
611 1R37 NAD 0.0001762 0.4685 15.1292
612 3T31 FAD 0.001777 0.44621 15.1292
613 3T31 DCQ 0.001932 0.44621 15.1292
614 1KEW TYD 0.006697 0.41801 15.1292
615 1KEW NAD 0.00738 0.41698 15.1292
616 2VT3 ATP 0.0001644 0.40979 15.3488
617 4GYW UDP 0.0006251 0.41216 15.4982
618 1YY5 FAD 0.001966 0.43641 15.8672
619 4EMJ FAD 0.01031 0.40118 15.8879
620 1O8B ABF 0.03172 0.40034 15.9817
621 2BD0 NAP 0.0008972 0.43685 15.9836
622 2FZW NAD 0.00006773 0.49734 16.2362
623 1MVN PCO 0.006924 0.40035 16.2679
624 1TUV VK3 0.01767 0.42814 16.6667
625 1GEG NAD 0.0005872 0.41787 17.1875
626 1YQZ FAD 0.004044 0.43362 18.0812
627 1DLJ NAI 0.0001222 0.49293 18.8192
628 1DLJ UGA 0.0001226 0.49285 18.8192
629 1H2B NAJ 0.00003918 0.49372 19.1882
630 4DEM YS4 0.002925 0.42648 20.6642
631 1ZK4 AC0 0.0002126 0.46623 21.5139
632 4K28 NAD 0.001071 0.45577 46.0967
Pocket No.: 5; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1nyt.bio3) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 1nyt.bio3) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1nyt.bio3) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: 60
This union binding pocket(no: 8) in the query (biounit: 1nyt.bio3) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1MXI SAH 0.0005239 0.42844 None
2 4P4T GDP 0.001637 0.41114 1.47601
3 1RYI GOA 0.00003073 0.46847 1.84502
4 1IIM TTP 0.001742 0.40439 1.84502
5 4FR3 0V4 0.003402 0.41883 2.13675
6 4N02 FNR 0.0005714 0.43446 2.21402
7 1NJR XYL 0.0004462 0.41066 2.58303
8 2G86 UMP 0.002497 0.41023 2.58303
9 2O2C G6Q 0.004658 0.40266 2.58303
10 1XOC VAL ASP SER LYS ASN THR SER SER TRP 0.0009717 0.41595 2.95203
11 1CSI CMX 0.002548 0.40128 2.95203
12 1CSI OAA 0.002548 0.40128 2.95203
13 1V5F TPP 0.04529 0.40058 2.95203
14 1V5F FAD 0.04529 0.40058 2.95203
15 4IAE 1DX 0.00254 0.41292 3.1746
16 4Q0A 4OA 0.002933 0.40228 3.32103
17 1ME8 RVP 0.01316 0.40184 3.32103
18 1P4C FMN 0.002609 0.42095 3.69004
19 1Y42 TYR 0.006503 0.41907 3.69004
20 2C31 TZD 0.01038 0.40281 3.69004
21 2C31 ADP 0.01001 0.40281 3.69004
22 3QUR ADP 0.001266 0.40121 3.69004
23 3QUR FM4 0.001266 0.40121 3.69004
24 4CS4 ANP 0.002251 0.40082 3.69004
25 4TMK T5A 0.02578 0.40197 3.75587
26 1Z44 FMN 0.002613 0.41621 4.05904
27 2RHW C0E 0.004144 0.41123 4.05904
28 3DGB MUC 0.005986 0.40664 4.05904
29 4IOK ADP 0.0008763 0.40013 4.05904
30 4RJK TPP 0.0005851 0.40707 4.42804
31 4NE2 ADP 0.001733 0.40088 4.42804
32 1H6W SER LEU ASN TYR ILE ILE LYS VAL LYS GLU 0.002929 0.40833 4.79705
33 2VJJ RAM GLC GAL NAG NAG GLC 0.003455 0.40592 4.79705
34 1SS4 CIT 0.002052 0.51531 5.22876
35 3WO0 ALA 0.001583 0.40456 5.53506
36 3WO0 ADP 0.001583 0.40456 5.53506
37 1HV9 UD1 0.00373 0.40083 5.53506
38 4G87 UD1 0.004233 0.40037 5.53506
39 2QLX RM4 0.002295 0.45776 5.55556
40 1L2T ATP 0.0003894 0.40289 5.95745
41 2NP9 YE1 0.0006828 0.41096 6.27306
42 1FIQ FAD 0.0005202 0.41739 6.84932
43 3WSJ MK1 0.004179 0.40187 6.89655
44 1D6H COA 0.001396 0.41395 7.38007
45 1QF5 GDP 0.0008689 0.42467 7.74908
46 1QF5 RPL 0.0008689 0.42467 7.74908
47 1NUS NMN 0.003516 0.40168 7.93651
48 1SSQ CYS 0.004168 0.40059 8.61423
49 2BTO GTP 0.001171 0.41109 9.25926
50 4CKU P2F 0.0015 0.41675 10.3321
51 1G6O ADP 0.006177 0.40094 11.0701
52 2BNF UTP 0.002582 0.40002 11.6183
53 1SG4 CO8 0.0006161 0.40477 11.9231
54 2OD9 A1R NCA 0.0004121 0.41486 12.3377
55 2QQF A1R 0.0003568 0.41023 12.3377
56 1B63 ANP 0.0003185 0.42309 14.7601
57 1NN5 ANP 0.001043 0.4024 15.3488
58 1NN5 2DT 0.001043 0.4024 15.3488
59 5H81 NAP 0.003144 0.44454 15.8672
60 1S8F GDP 0.0003416 0.41253 17.5141
Pocket No.: 9; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1nyt.bio1) has 26 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 1nyt.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1nyt.bio1) has 25 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 1NYT; Ligand: NAP; Similar sites found: 168
This union binding pocket(no: 12) in the query (biounit: 1nyt.bio1) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4RSL FAD 0.001156 0.43748 1.47601
2 2VZ0 D64 0.03364 0.40125 1.49254
3 2VZ0 NAP 0.03364 0.40125 1.49254
4 3VZS CAA 0.004562 0.43472 1.55642
5 5J60 FAD 0.00156 0.4366 1.84502
6 4Z24 FAD 0.006085 0.41371 1.84502
7 1OC2 TDX 0.004888 0.42782 2.21402
8 5JWC FAD 0.002285 0.42406 2.21402
9 5MQ6 NDP 0.002257 0.40398 2.21402
10 5KMS NAD 0.002281 0.44381 2.58303
11 4AP3 FAD 0.002856 0.44099 2.58303
12 4CJX NAP 0.0005266 0.43691 2.58303
13 4BV6 FAD 0.001855 0.43448 2.58303
14 4TXI FAD 0.001308 0.43018 2.58303
15 5JE8 NAD 0.0008836 0.42803 2.58303
16 5EZ7 FAD 0.003448 0.42111 2.58303
17 5KMS FAD 0.003068 0.41994 2.58303
18 5TUF FAD 0.0004483 0.40868 2.58303
19 5DOZ NDP 0.001632 0.4007 2.58303
20 5EPO NAP 0.003033 0.41268 2.67176
21 3WV8 ATP 0.000428 0.41765 2.75229
22 4ZCC NAI 0.000445 0.46969 2.95203
23 4ZCC FAD 0.000445 0.46969 2.95203
24 1YKJ PHB 0.002267 0.44684 2.95203
25 5JY6 NAD 0.001923 0.44138 2.95203
26 4MOP 2H5 0.002613 0.43731 2.95203
27 4J7U YTZ 0.002523 0.42987 2.95203
28 4J7U NAP 0.002523 0.42987 2.95203
29 1EK6 NAI 0.009477 0.41378 2.95203
30 5EOW FAD 0.002719 0.41975 3.20988
31 5T2U NAP 0.00143 0.42993 3.22581
32 4IDC NDP 0.0002557 0.46046 3.32103
33 4FC7 COA 0.00063 0.4553 3.32103
34 5U8U FAD 0.001672 0.45409 3.32103
35 3CGD COA 0.003008 0.44956 3.32103
36 3CGD FAD 0.003008 0.44956 3.32103
37 5G3U ITW 0.001356 0.44326 3.32103
38 5G3U FDA 0.0009753 0.44289 3.32103
39 5X20 NAD 0.0006943 0.43217 3.32103
40 5UAO FAD 0.003215 0.42132 3.32103
41 5WGR FAD 0.004119 0.4189 3.32103
42 5LD5 NAD 0.001139 0.41686 3.32103
43 5J7X FAD 0.004634 0.41469 3.32103
44 4D7E FAD 0.005733 0.4087 3.32103
45 5BUK FAD 0.0005422 0.46016 3.69004
46 1Q9I TEO 0.001223 0.45489 3.69004
47 1F06 2NP 0.0003832 0.45466 3.69004
48 1UWK NAD 0.0007985 0.45403 3.69004
49 5A04 NDP 0.001322 0.45262 3.69004
50 5A04 BGC 0.001616 0.45262 3.69004
51 5CAE SIN 0.0006836 0.44302 3.69004
52 1E1M FAD 0.002017 0.44301 3.69004
53 5JCM NAD 0.004649 0.43436 3.69004
54 4YRY FAD 0.002052 0.43365 3.69004
55 5JCM ISD 0.00517 0.43231 3.69004
56 5JCM FAD 0.004997 0.43231 3.69004
57 4YRY NAD 0.003588 0.43214 3.69004
58 5CAE COA 0.0005769 0.43171 3.69004
59 5BSH PRO 0.00513 0.40602 3.69004
60 5BR7 FAD 0.02175 0.40263 3.69004
61 5BR7 FLC 0.02335 0.40126 3.69004
62 5ITV NAI 0.00057 0.44343 3.92157
63 4ZA2 NAD 0.00324 0.41015 3.95257
64 2JHF NAD 0.0002276 0.52225 4.05904
65 4OPC FDA 0.001857 0.46708 4.05904
66 4YCA NDP 0.0001277 0.45507 4.05904
67 5E4R NAP 0.0004083 0.44625 4.05904
68 4D04 FAD 0.002602 0.44419 4.05904
69 4XDZ NDP 0.0004572 0.43934 4.05904
70 5TTJ FAD 0.001676 0.4342 4.05904
71 2CDC NAP 0.0003716 0.4831 4.42804
72 5I39 FAD 0.0006568 0.45004 4.42804
73 3UOY FAD 0.004616 0.43578 4.42804
74 5KVS 6XR 0.005268 0.40677 4.42804
75 4XYB NDP 0.0005173 0.40234 4.42804
76 3H4V NAP 0.006008 0.40069 4.42804
77 4ZGS NAD 0.00006496 0.46944 4.79705
78 4KP7 NAP 0.0005727 0.46215 4.79705
79 1J0X NAD 0.0004769 0.46148 4.79705
80 4KP7 1UQ 0.0004995 0.46063 4.79705
81 3WQQ IB3 0.0005407 0.457 4.79705
82 5AYV KPL 0.0005135 0.45076 4.79705
83 5AYV NAP 0.0002121 0.44369 4.79705
84 4D79 ATP 0.00008176 0.4401 4.79705
85 3ZNN FAD 0.003412 0.4354 4.79705
86 4RDI ATP 0.0001126 0.43361 4.79705
87 4YAG NAI 0.002438 0.43049 4.79705
88 4RDH AMP 0.00008386 0.42831 4.79705
89 5T9F TYR 0.00002005 0.51169 5.16605
90 5T9F NAP 0.00002192 0.50863 5.16605
91 5T9E NAP 0.00003998 0.48307 5.16605
92 4XDY NAI 0.0001809 0.45703 5.16605
93 5MBX SP5 0.002805 0.43758 5.16605
94 5MBX FAD 0.002805 0.43758 5.16605
95 4D42 W0I 0.005354 0.42221 5.16605
96 4D42 NAP 0.005354 0.42221 5.16605
97 1GPE FAD 0.004935 0.42032 5.16605
98 4RVU NDP 0.003254 0.41655 5.16605
99 3NYC IAR 0.001033 0.45389 5.53506
100 5L4S NAP 0.001109 0.4394 5.53506
101 5L4S 6KX 0.001109 0.4394 5.53506
102 5TUK FAD 0.001701 0.4199 5.53506
103 1U3U NAD 0.00003187 0.50997 5.90406
104 5UAV NDP 0.00004817 0.4945 5.90406
105 5UAV TFB 0.00004817 0.4945 5.90406
106 5DN9 NAD 0.0007072 0.44242 5.90406
107 5GUD NDP 0.002043 0.43062 5.90406
108 5HSA FAS 0.004052 0.4202 5.90406
109 4RPL FAD 0.01718 0.40843 5.90406
110 5GUD 2IT 0.00676 0.40681 5.90406
111 4ZRN NAD 0.007782 0.40099 5.90406
112 4ZRN UPG 0.01591 0.40098 5.90406
113 5KQA GSH 0.03222 0.40081 6.06061
114 5O4J 9KH 0.0002963 0.45924 6.27306
115 5O4J SAH 0.0002963 0.45924 6.27306
116 5O4J PJL 0.0002984 0.45772 6.27306
117 1WMA NDP 0.001941 0.43567 6.27306
118 1T9D P22 0.0112 0.42817 6.27306
119 4X9M FAD 0.002283 0.42965 6.64207
120 4UP3 FAD 0.004943 0.41557 6.64207
121 4UP3 NDP 0.0009809 0.41476 6.64207
122 5GT9 NAP 0.001684 0.42438 6.84411
123 5U5G NAP 0.00002083 0.49809 7.01107
124 4XQC NAD 0.0001842 0.47897 7.01107
125 4XQC 13D 0.0003589 0.46777 7.01107
126 4REP FAD 0.005564 0.41241 7.01107
127 5N53 8NB 0.02483 0.41193 7.69231
128 5KKA 6V0 0.00006227 0.48396 7.74908
129 4XB2 NDP 0.00003046 0.47671 7.74908
130 4XB2 HSE 0.00009387 0.47671 7.74908
131 3ETG NDP 0.004545 0.42768 7.74908
132 3NJ4 NAD 0.00009758 0.53432 8.11808
133 3NJ4 AFX 0.00009758 0.53432 8.11808
134 4OHU NAD 0.02042 0.4006 8.48709
135 4OHU 2TK 0.02042 0.4006 8.48709
136 5N2I NAP 0.0000708 0.45365 8.62069
137 5MZI FYK 0.001925 0.44854 8.85609
138 5MZI FAD 0.001851 0.44854 8.85609
139 3WXB NDP 0.001248 0.40273 8.85609
140 4YSX FAD 0.0002122 0.47291 9.57447
141 3CH6 NAP 0.002151 0.44713 9.5941
142 5ODQ FAD 0.002242 0.43203 9.5941
143 5D4V SAH 0.000152 0.44399 9.70149
144 5M67 3D1 0.000007294 0.54446 9.9631
145 5M67 NAD 0.000008287 0.54208 9.9631
146 5M67 ADE 0.00000847 0.54167 9.9631
147 3UCL FAD 0.004577 0.43466 9.9631
148 5VN0 NAI 0.001065 0.41922 9.9631
149 3A4V PYR 0.00437 0.41358 9.9631
150 3AD8 PYC 0.009279 0.42161 10.101
151 5THQ NDP 0.002145 0.41876 10.3321
152 2PZM UDP 0.009142 0.40713 11.0701
153 1QG6 TCL 0.01297 0.40066 11.1111
154 4A0S NAP 0.000341 0.45247 11.8081
155 5DP2 NAP 0.003559 0.40709 11.9883
156 5JCA FAD 0.001198 0.44353 12.5461
157 5JCA NDP 0.002748 0.44244 12.5461
158 5FJN BE2 0.001526 0.44205 12.5461
159 5FJN FAD 0.001298 0.44205 12.5461
160 5FI3 NAP 0.000006703 0.51972 12.9151
161 5BVA FAD 0.0004543 0.46342 12.9151
162 5GZ6 7C3 0.0003829 0.43375 12.9151
163 5GZ6 NDP 0.0002347 0.43214 12.9151
164 5L95 AMP 0.00007508 0.44448 13.75
165 3GGO ENO 0.0002056 0.47467 14.0221
166 4JBI NDP 0.0009139 0.42745 14.0221
167 5VKT NAP 0.000005265 0.52394 19.0608
168 4D3F NAP 0.00002693 0.4738 20.6642
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