Receptor
PDB id Resolution Class Description Source Keywords
1NVV 2.18 Å EC: 3.-.-.- STRUCTURAL EVIDENCE FOR FEEDBACK ACTIVATION BY RASGTP OF THE RAS-SPECIFIC NUCLEOTIDE EXCHANGE FACTOR SOS HOMO SAPIENS PROTO-ONCOGENE GTP-BINDING GUANINE-NUCLEOTIDE RELEASING FACTOR SIGNALING PROTEIN
Ref.: STRUCTURAL EVIDENCE FOR FEEDBACK ACTIVATION BY RASGTP OF THE RAS-SPECIFIC NUCLEOTIDE EXCHANGE FACTOR SOS CELL(CAMBRIDGE,MASS.) V. 112 685 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP Q:1001;
Valid;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG Q:1002;
Part of Protein;
none;
submit data
24.305 Mg [Mg+2...
PO4 Q:1007;
R:1003;
S:1047;
S:1048;
S:1049;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
submit data
94.971 O4 P [O-]P...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1NVV 2.18 Å EC: 3.-.-.- STRUCTURAL EVIDENCE FOR FEEDBACK ACTIVATION BY RASGTP OF THE RAS-SPECIFIC NUCLEOTIDE EXCHANGE FACTOR SOS HOMO SAPIENS PROTO-ONCOGENE GTP-BINDING GUANINE-NUCLEOTIDE RELEASING FACTOR SIGNALING PROTEIN
Ref.: STRUCTURAL EVIDENCE FOR FEEDBACK ACTIVATION BY RASGTP OF THE RAS-SPECIFIC NUCLEOTIDE EXCHANGE FACTOR SOS CELL(CAMBRIDGE,MASS.) V. 112 685 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 218 families.
1 1NVV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 176 families.
1 1NVV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 143 families.
1 1NVV - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 128
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 GDP 0.839506 0.973684
3 GP3 0.82716 0.948718
4 GTP 0.809524 0.973684
5 GNH 0.807229 0.986842
6 G1R 0.77907 0.961039
7 GCP 0.77907 0.948718
8 GSP 0.770115 0.925
9 5GP 0.756098 0.960526
10 G 0.756098 0.960526
11 G2R 0.747253 0.936709
12 GMV 0.747126 0.948718
13 GAV 0.714286 0.936709
14 GP2 0.712644 0.936709
15 G2P 0.711111 0.936709
16 Y9Z 0.708333 0.880952
17 GDP MG 0.696629 0.9
18 GDD 0.690722 0.936709
19 GDC 0.690722 0.936709
20 GKE 0.690722 0.936709
21 GDP BEF 0.688889 0.878049
22 G5P 0.686869 0.948718
23 GPG 0.684211 0.936709
24 GTG 0.683673 0.91358
25 GFB 0.683673 0.936709
26 GDR 0.683673 0.936709
27 JB2 0.68 0.936709
28 GKD 0.68 0.936709
29 G3A 0.676768 0.948718
30 6CK 0.676768 0.91358
31 GDX 0.673267 0.948718
32 ALF 5GP 0.67033 0.86747
33 GTP MG 0.666667 0.9
34 BEF GDP 0.666667 0.86747
35 YGP 0.663265 0.879518
36 GCP G 0.659574 0.911392
37 GPD 0.656863 0.902439
38 GDP AF3 0.645833 0.86747
39 GDP ALF 0.645833 0.86747
40 JB3 0.641509 0.925
41 DBG 0.640351 0.974359
42 G3D 0.638298 0.960526
43 G4P 0.625 0.960526
44 GMP 0.621951 0.857143
45 NGD 0.62037 0.936709
46 GGM 0.618182 0.925926
47 0O2 0.616162 0.960526
48 G G 0.61 0.911392
49 2MD 0.603604 0.870588
50 CAG 0.60177 0.904762
51 U2G 0.590909 0.91358
52 FEG 0.590909 0.858824
53 GDP 7MG 0.590476 0.888889
54 MGD 0.587719 0.870588
55 ZGP 0.585586 0.848837
56 CG2 0.580357 0.91358
57 ANP 0.568421 0.922078
58 PGD 0.567797 0.902439
59 MD1 0.567797 0.870588
60 3GP 0.56044 0.922078
61 TPG 0.558333 0.822222
62 GH3 0.55 0.948052
63 FE9 0.546219 0.778947
64 GPX 0.539216 0.922078
65 G4M 0.539062 0.860465
66 DGI 0.536082 0.9
67 BGO 0.535088 0.901235
68 IDP 0.53125 0.947368
69 DGT 0.53 0.9
70 2GP 0.526882 0.935065
71 G1R G1R 0.520325 0.901235
72 I2C FE2 CMO CMO 0.516667 0.811111
73 U A G G 0.512605 0.911392
74 AGO 0.504202 0.91358
75 G A A A 0.504202 0.9
76 P2G 0.5 0.860759
77 G1G 0.5 0.902439
78 MGP 0.49505 0.936709
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 DGP 0.474227 0.8875
83 DG 0.474227 0.8875
84 G G U 0.473684 0.911392
85 IMP 0.463918 0.934211
86 G2Q 0.462963 0.936709
87 GPC 0.459677 0.858824
88 G C 0.459016 0.878049
89 GTA 0.448276 0.91358
90 G7M 0.444444 0.924051
91 MAP 0.439252 0.898734
92 G G G RPC 0.435484 0.853659
93 B4P 0.434343 0.871795
94 AP5 0.434343 0.871795
95 ADP 0.434343 0.896104
96 A2D 0.43299 0.871795
97 U G A 0.431655 0.86747
98 G G G C 0.426357 0.890244
99 SGP 0.425743 0.807229
100 AU1 0.425743 0.922078
101 BA3 0.424242 0.871795
102 35G 0.423077 0.909091
103 PCG 0.423077 0.909091
104 A G C C 0.423077 0.888889
105 C2E 0.423077 0.897436
106 APC G U 0.421875 0.864198
107 ATP 0.421569 0.896104
108 ACQ 0.419048 0.873418
109 5GP 5GP 0.419048 0.860759
110 AQP 0.417476 0.896104
111 5FA 0.417476 0.896104
112 01G 0.417391 0.880952
113 UNP 0.415842 0.810127
114 AN2 0.415842 0.909091
115 6AD 0.415094 0.821429
116 ITT 0.411765 0.846154
117 M33 0.411765 0.860759
118 G C C C 0.410448 0.901235
119 G U34 0.408 0.86747
120 ACP 0.407767 0.873418
121 APR 0.403846 0.871795
122 AR6 0.403846 0.871795
123 DG DG 0.403509 0.845238
124 A4P 0.403226 0.848837
125 UCG 0.402985 0.888889
126 AD9 0.4 0.873418
127 SAP 0.4 0.851852
128 AGS 0.4 0.851852
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 5; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: 372
This union binding pocket(no: 6) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 2UVO NAG 0.03595 0.40851 1.75439
2 2HXW FLC 0.009654 0.43156 2.1097
3 2X77 GDP 0.000000000608 0.76733 2.1164
4 1B0U ATP 0.001698 0.44583 2.29008
5 2ZFI ADP 0.00001545 0.56131 2.40964
6 3N5C GDP 0.000000006111 0.73017 2.46914
7 5FTB ANP 0.0002026 0.49402 3.01205
8 5FHD ADP ALF 0.000378 0.4621 3.01205
9 1OSS BEN 0.03182 0.40426 3.13901
10 4D81 ADP 0.0002468 0.40432 3.53357
11 1M7G ADX 0.001592 0.42398 3.61446
12 1M7G ADP 0.002067 0.41653 3.61446
13 1M7G AV2 0.00002377 0.40873 3.61446
14 3H86 AP5 0.001499 0.4291 3.64583
15 1G41 ADP 0.0001293 0.50326 3.82883
16 2IYL GDP 0.000008304 0.5747 4.21687
17 4WZ6 ATP 0.00004862 0.55818 4.21687
18 1YTM ATP 0.0006185 0.4528 4.21687
19 1YXM ADE 0.00556 0.42772 4.21687
20 2Z48 NGA 0.03816 0.41136 4.21687
21 5HR5 ADP 0.0004069 0.40366 4.21687
22 1HTW ADP 0.0001298 0.40199 4.43038
23 2W58 ADP 0.000001224 0.66248 4.45545
24 3DC4 ADP 0.000002884 0.61567 4.81928
25 1JI0 ATP 0.00004491 0.55342 4.81928
26 3EZ2 ADP 0.00005018 0.54317 4.81928
27 5M04 GDP 0.000000001715 0.53025 4.81928
28 3B7G ANP 0.0007319 0.47274 4.81928
29 4OHY ANP 0.0001418 0.46739 4.81928
30 2OZE AGS 0.0001164 0.43018 4.81928
31 5I34 GDP 0.00008187 0.41113 4.81928
32 5I0H ADP BEF 0.0000009756 0.51032 5.42169
33 1Z6T ADP 0.000295 0.47605 5.42169
34 1P9B GDP 0.0003888 0.47062 5.42169
35 1OYY AGS 0.004246 0.44024 5.42169
36 1G8S MET 0.01121 0.42877 5.42169
37 4U60 SIA GAL NGA 0.01053 0.42324 5.42169
38 4U60 SIA 0.01147 0.42021 5.42169
39 4GOX A3P 0.00267 0.41832 5.42169
40 4U60 SIA GAL BGC NGA GAL 0.02761 0.40345 5.42169
41 1P9B HDA 0.03893 0.40213 5.42169
42 2Q2Y ADP 0.001682 0.43304 5.44959
43 2Q2Y MKR 0.001899 0.42972 5.44959
44 3IO3 ADP 0.000073 0.43845 5.45977
45 3UIE ANP 0.0001065 0.50724 5.5
46 4KAX GTP 0.00000000004055 0.67845 5.59006
47 1XXR MAN 0.0303 0.40665 5.59006
48 4YDS ATP 0.00003477 0.55922 5.70175
49 5N69 ADP 0.00002568 0.43642 5.82121
50 1G6H ADP 0.000008949 0.60913 5.83658
51 4FRZ ADP 0.000009315 0.4011 5.95855
52 4RD0 GDP 0.00000000001356 0.69308 6.0241
53 2A5F GTP 0.0000000002465 0.66941 6.0241
54 3NHB ADP 0.00004144 0.56166 6.0241
55 3Q9L ATP 0.00002144 0.52763 6.0241
56 2OBM ADP 0.0002925 0.51875 6.0241
57 1F5N GNP 0.000009718 0.50541 6.0241
58 2C9O ADP 0.00007469 0.4927 6.0241
59 5MZN ADP 0.0007904 0.48839 6.0241
60 3FWY ADP 0.000004505 0.47073 6.0241
61 5J1J ANP 0.0000293 0.46967 6.0241
62 3FVQ ATP 0.0003296 0.46468 6.0241
63 2Z5F A3P 0.007292 0.40617 6.0241
64 3QKT ANP 0.002186 0.40378 6.0241
65 2CE7 ADP 0.0001899 0.40006 6.0241
66 1OS1 PYR 0.004381 0.40489 6.02911
67 1OS1 ATP 0.004554 0.40281 6.02911
68 1W5T ANP 0.0009291 0.44512 6.06796
69 1W5T ADP 0.002002 0.43835 6.06796
70 4GBM A3P 0.006569 0.40195 6.19195
71 5BQ5 ADP BEF 0.0001954 0.49477 6.34921
72 3WY9 GDP 0.0000000004901 0.79803 6.45161
73 3WYA GDP 0.000000002085 0.75334 6.45161
74 4OWK NGA 0.03032 0.41392 6.52174
75 2BEK ATP 0.0001944 0.47017 6.61479
76 3U6B GDP 0.000000000318 0.80759 6.62651
77 2BVN GNP 0.00000000003735 0.80037 6.62651
78 4G5G GDP 0.000000001148 0.76621 6.62651
79 3U6K GDP 0.000000001617 0.75881 6.62651
80 3WXM GTP 0.0000000001073 0.69151 6.62651
81 3VMF GTP 0.0000000001113 0.69092 6.62651
82 2HCJ GDP 0.0000000002663 0.54441 6.62651
83 1D8T GDP 0.0000000008958 0.54339 6.62651
84 5JBQ GDP 0.000000001071 0.54153 6.62651
85 1FP6 ADP 0.00001592 0.53974 6.62651
86 2DPY ADP 0.0001204 0.53107 6.62651
87 4WZA ACP 0.00002985 0.52631 6.62651
88 4WZA ADP 0.00002985 0.52631 6.62651
89 4R43 GDP 0.0002713 0.49956 6.62651
90 1EXF GLY 0.001007 0.48587 6.62651
91 4QOS ADP 0.0007602 0.46683 6.62651
92 2FNA ADP 0.000291 0.4627 6.62651
93 4RZ3 ADP 0.00005938 0.43826 6.62651
94 1ION ADP 0.00005639 0.42211 6.62651
95 3RC3 ANP 0.01395 0.4187 6.62651
96 2NZ5 226 0.0136 0.41855 6.62651
97 2ZPA ADP 0.0002885 0.41448 6.62651
98 1UPT GTP 0.00000000001533 0.69185 6.66667
99 5K5Z ANP 0.00006775 0.46198 6.6879
100 5L3W GDP 0.00001895 0.44167 6.86275
101 4KJU 1RH 0.01959 0.41636 6.97674
102 5XDR ADP 0.001389 0.45925 7.06861
103 3CNL GNP 0.000000007721 0.73712 7.22892
104 3PCR GTP 0.0000000003349 0.70668 7.22892
105 1WDT GTP 0.000000004547 0.68477 7.22892
106 1GOJ ADP 0.0000007515 0.66607 7.22892
107 3ZFD ANP 0.00000008128 0.51211 7.22892
108 1SQ5 ADP 0.0001805 0.5022 7.22892
109 2GK6 ADP 0.0009972 0.48312 7.22892
110 2X7I CIT 0.002915 0.44836 7.22892
111 5IRN ADP 0.0001443 0.41259 7.22892
112 4E03 ADP 0.00001737 0.43453 7.28155
113 1W7J ADP BEF 0.00001073 0.54126 7.28477
114 2VB6 ADP BEF 0.00004674 0.46133 7.69231
115 4YS0 ADP 0.001025 0.45154 7.69231
116 4PFO ADP 0.0001817 0.45018 7.69231
117 5H56 ADP 0.005143 0.40208 7.69231
118 5H56 TYD 0.005143 0.40208 7.69231
119 1QAN SAH 0.001364 0.43053 7.78689
120 1TQ4 GDP 0.00000005024 0.63057 7.83133
121 2XT3 ADP 0.000003004 0.62711 7.83133
122 2WHX ADP 0.00003994 0.56229 7.83133
123 4H1V GNP 0.000007666 0.54787 7.83133
124 3T34 GDP 0.00002103 0.50623 7.83133
125 4V03 ADP 0.00001528 0.43912 7.83133
126 4OKD GLC GLC GLC 0.009463 0.43728 7.83133
127 3E70 GDP 0.00001631 0.43687 7.83133
128 1LVG ADP 0.00000576 0.41439 7.83133
129 1DNP MHF 0.01565 0.41152 7.83133
130 2JLR ANP 0.0003176 0.40318 7.83133
131 2C78 GNP 0.00000000003562 0.75718 7.90123
132 2C77 GNP 0.00000000005541 0.66086 7.90123
133 1NJF AGS 0.0003137 0.42585 8
134 1NJF ADP 0.0002295 0.41888 8
135 1VHT BA3 0.001035 0.46048 8.25688
136 1V0O INR 0.006736 0.41444 8.33333
137 5HCN GCP 0.0000000003526 0.7788 8.42912
138 3LRE ADP 0.0000009712 0.65796 8.43373
139 5IRR GSP 0.00000002615 0.63509 8.43373
140 4CVN ADP 0.00001657 0.57602 8.43373
141 2RCN GDP 0.00000000009929 0.56998 8.43373
142 4IDN GNP 0.00003179 0.50367 8.43373
143 2BIF ANP 0.001638 0.42621 8.43373
144 2BIF SIN 0.002917 0.42621 8.43373
145 1K6M AGS 0.002092 0.42275 8.43373
146 3BFX A3P 0.004358 0.41938 8.43373
147 4MKF AP5 0.004344 0.41691 8.43373
148 3FYH ADP 0.004679 0.4051 8.43373
149 4WOP CTP 0.00006111 0.44599 8.44444
150 5EE5 GTP 0.000000000002401 0.72058 8.4507
151 1QF5 RPL 0.003761 0.45599 8.58469
152 1ZVX FIN 0.006155 0.40518 8.58896
153 3TK1 GDP 0.0000000005715 0.80897 9.03614
154 1AZT GSP 0.0000000001892 0.66719 9.03614
155 1D2E GDP 0.00000003171 0.66477 9.03614
156 1V8K ANP 0.0000007554 0.62636 9.03614
157 4LYA ATP 0.00003361 0.53757 9.03614
158 4ZG4 VO4 ADP 0.00000214 0.51128 9.03614
159 4IOK ADP 0.001209 0.42426 9.03614
160 4MKG AP5 0.002886 0.42327 9.03614
161 4IOK XPO 0.0008635 0.42026 9.03614
162 5G41 AP5 0.007622 0.41048 9.03614
163 2VVG ADP 0.000000802 0.403 9.03614
164 3BFV ADP 0.0000863 0.52425 9.22509
165 3FB4 AP5 0.004889 0.41372 9.25926
166 2YY8 MTA 0.005413 0.43058 9.45274
167 4J0Q GDP 0.000000002059 0.76633 9.63855
168 2NCD ADP 0.00001317 0.58761 9.63855
169 4PC3 GDP 0.00000004189 0.53227 9.63855
170 1KK1 GNP 0.000000008232 0.51348 9.63855
171 3R7F CP 0.01122 0.43049 9.63855
172 3DOE GTP 0.00000000005299 0.74013 9.69697
173 2OG2 MLI 0.00009857 0.53546 9.7493
174 3ZS9 ADP ALF 0.00002781 0.48737 9.88701
175 2WOJ ADP ALF 0.00003798 0.48202 9.88701
176 4XTR ATP 0.00007335 0.45557 9.88701
177 4XVU ATP 0.00007693 0.45488 9.88701
178 4XTR ADP 0.00005888 0.44187 9.88701
179 2GMP NAG MAN 0.0163 0.42264 9.92064
180 2GMM MAN MAN 0.02715 0.40131 9.92064
181 2QZ4 ADP 0.0001125 0.50613 9.92366
182 1APZ ASP 0.03674 0.40094 9.92908
183 2FAH GDP 0.0003266 0.40752 9.97921
184 1PTR PRB 0.01726 0.42107 10
185 4P32 ADP 0.004986 0.4101 10.0402
186 2GWH A3P 0.006499 0.41514 10.0671
187 1SKQ GDP 0.00000002729 0.70923 10.241
188 4P3Y GDP 0.0000000004152 0.54068 10.241
189 1FNN ADP 0.0003708 0.4669 10.241
190 1IN4 ADP 0.0005321 0.45994 10.241
191 4A4Z ANP 0.005992 0.4328 10.241
192 1D2N ANP 0.004492 0.41534 10.241
193 1GJW GLC 0.01757 0.40867 10.241
194 2ODE ALF GDP 0.0000000004333 0.68309 10.2857
195 3ZQ6 ADP ALF 0.00002565 0.48876 10.4938
196 2CBZ ATP 0.000002251 0.64526 10.5485
197 2OFW ADX 0.002256 0.42661 10.5769
198 1VBO MAN 0.008186 0.44082 10.7383
199 1VBO MAN MAN MAN 0.04186 0.4013 10.7383
200 3COB ADP 0.000001931 0.40632 10.8401
201 5VGR GDP 0.000531 0.46448 10.8434
202 1F9V ADP 0.000009846 0.40203 10.8434
203 5GOE GDP 0.00000002725 0.6773 11.4458
204 2WIC GNP 0.00000006556 0.66885 11.4458
205 4XGU ADP 0.0003726 0.47145 11.4458
206 4R98 GNH 0.000001596 0.46331 11.4458
207 1ZUI SKM 0.000777 0.44207 11.4458
208 1SVK ALF GDP 0.0000000005767 0.68088 11.6147
209 5KUT GDP 0.000000002076 0.54599 11.6402
210 1X6V ADP 0.002099 0.40299 11.6424
211 2WJG GDP 0.00000002956 0.6962 12.0482
212 1JJV ATP 0.00005409 0.55494 12.0482
213 2WJH GDP 0.00000002983 0.525 12.0482
214 4IEE AGS 0.00119 0.47322 12.0482
215 2WJH FLC 0.000003131 0.46558 12.0482
216 1F2U ATP 0.004297 0.40087 12.0805
217 3KTA AP5 0.000626 0.46591 12.1387
218 1B7T ADP 0.00004136 0.52669 12.1795
219 3B9Q MLI 0.0001683 0.52713 12.2517
220 1L2T ATP 0.001277 0.42825 12.3404
221 1Y3A GDP 0.0000001442 0.55862 12.462
222 1KSH GDP 0.000000000009613 0.68668 12.5
223 2OM2 GDP 0.000001016 0.57382 12.6154
224 4NON GDP 0.00000035 0.55248 12.6506
225 3FKQ ATP 0.00001467 0.5351 12.6506
226 1Z03 OCH 0.03393 0.40278 12.6506
227 1XEX ATP 0.004692 0.40215 12.7907
228 1BH2 GSP 0.0000000005391 0.65 13.0159
229 1Y63 ADP 0.00004292 0.5393 13.0435
230 1JJ7 ADP 0.000005982 0.62054 13.253
231 5J1S ATP 0.001929 0.40638 13.253
232 2HF9 GSP 0.000000156 0.6245 13.2743
233 2J5V PCA 0.02371 0.43046 13.3515
234 1KK8 BEF ADP 0.00001325 0.53711 13.6691
235 1G3Q ADP 0.00002606 0.54292 13.8554
236 3B5J 12D 0.00007627 0.54142 13.8554
237 4MDB RLT 0.01137 0.43417 13.8554
238 5XVQ 8GC 0.03576 0.40342 13.8554
239 3BER AMP 0.01033 0.42102 14.0562
240 4Q1A 2XZ 0.01726 0.43517 14.2857
241 4Q1A UDP 0.01726 0.43517 14.2857
242 3PQC GDP 0.00000002223 0.68148 14.4578
243 5L3R GCP 0.000002666 0.53812 14.4578
244 2PL3 ADP 0.0003936 0.49766 14.4578
245 3H4S ADP 0.000002759 0.40186 14.8148
246 4BAS GNP 0.000000001702 0.61951 15.0754
247 2XTZ GSP 0.00000000003699 0.71082 15.2542
248 4XDY HIO 0.03548 0.40568 15.3846
249 1CS4 GSP 0.0000000002699 0.6731 15.566
250 4TMZ GSP 0.000000000006085 0.7794 15.6627
251 4NCN GTP 0.00000000000319 0.72586 15.6627
252 4UOX PUT 0.009693 0.41073 15.6627
253 1G7C 5GP 0.0000009863 0.62061 15.9574
254 3CX8 GSP 0.0000000001666 0.6689 16.2651
255 2AWN ADP 0.000001155 0.66427 16.2651
256 1ZCB GDP 0.0000001191 0.57419 16.2651
257 3AB3 GDP 0.00000002299 0.57376 16.2651
258 1MKY GDP 0.0000000002562 0.55775 16.2651
259 2CHG ANP 0.0002298 0.48096 16.2651
260 3RLF ANP 0.0004612 0.4502 16.2651
261 1FQJ ALF 0.00000002604 0.73087 16.6667
262 1FQJ GDP 0.0000000379 0.62088 16.6667
263 3IIJ ADP 0.00002798 0.41233 16.6667
264 1OFH ADP 0.0001901 0.4039 16.6667
265 2C04 GCP 0.000184 0.48533 17.1717
266 1PUJ GNP 0.000000002918 0.56828 17.4699
267 2ZTS ADP 0.001568 0.4391 17.4699
268 1LOB MMA 0.02013 0.41668 17.4699
269 5X40 ACP 0.001325 0.40698 17.4699
270 3ZIA ADP 0.0001919 0.4095 18.0328
271 3ZIA ATP 0.00008552 0.40902 18.0328
272 4OI4 ATP 0.001763 0.42586 18.0723
273 5CK5 GDP 0.0000000005747 0.54105 18.6747
274 4HSE ADP 0.00004558 0.53116 18.6747
275 1XP8 AGS 0.0007677 0.4829 18.6747
276 1GXU 2HP 0.0004131 0.48071 18.6813
277 4P4T GDP 0.000008541 0.53955 19.2771
278 2W83 GTP 0.0000000000867 0.7312 19.4805
279 1IHU AF3 0.00004736 0.4963 19.8795
280 5L3S GNP 0.00001417 0.4874 19.8795
281 1IHU ADP 0.00005954 0.48735 19.8795
282 5L3V GDP 0.000008728 0.45091 19.8795
283 4BQS ADP 0.0001244 0.51637 20.4545
284 4BQS K2Q 0.007115 0.40259 20.4545
285 4PPF FLC 0.00003088 0.5692 20.4819
286 1H65 GDP 0.000005791 0.53518 20.4819
287 2ZR9 DTP 0.0004347 0.4894 20.4819
288 4LPS GDP 0.0000003407 0.63417 22.8916
289 1CR1 TTP 0.0008433 0.40408 22.8916
290 3A4M ADP 0.00001499 0.40276 23.494
291 2FH5 GTP 0.000000000004995 0.80453 24.0964
292 4ZKD GDP 0.0000000002811 0.68468 24.0964
293 3DEF GDP 0.000001042 0.59455 24.0964
294 3W5J GDP 0.000003517 0.62047 25.3012
295 2V7Q ADP 0.00004939 0.53627 25.3012
296 2V7Q ATP 0.0001099 0.5066 25.3012
297 2CK3 ANP 0.0003368 0.46875 25.3012
298 2CK3 ADP 0.0004997 0.44875 25.3012
299 1W0J ADP 0.0001553 0.41425 25.3012
300 1W0J ADP BEF 0.0003323 0.41391 25.3012
301 3DZD ADP 0.0008189 0.4605 26.506
302 4M9Q GNP 0.00000000002829 0.76143 27.7108
303 4V0K GDP 0.0000009237 0.55699 27.7108
304 1DAR GDP 0.00000006786 0.50166 27.7108
305 4B47 GDP 0.0000000001678 0.82171 28.3133
306 3KJI ADP 0.00004042 0.43882 28.9157
307 1R4A GNP 0.00000000006448 0.69031 29.4118
308 1YRB GDP 0.000000000155 0.77176 29.5181
309 3T12 GDP ALF 0.0000000007612 0.70052 29.5181
310 3T1O GDP 0.0000002135 0.50529 29.5181
311 3QF7 ANP 0.002319 0.41739 30
312 1G7S GDP 0.000000006632 0.71705 30.1205
313 2PEZ DAT 0.002383 0.41827 31.2849
314 2PEZ GGZ 0.002383 0.41827 31.2849
315 1J2J GTP 0.00000000002552 0.75339 31.9277
316 2J59 GTP 0.00000000004597 0.74271 31.9277
317 1O3Y GTP 0.00000000008468 0.73163 31.9277
318 5FG3 GDP 0.0000000001331 0.55296 31.9277
319 4DCT GDP 0.0000000002602 0.78519 32.5301
320 1ZD9 GDP 0.00000000002493 0.78508 32.5301
321 1S9D GDP 0.00000002037 0.69344 32.5301
322 1RE0 GDP 0.000000001796 0.52846 32.5301
323 3AQ4 GDP 0.00000001068 0.70703 33.1325
324 2QN6 GDP 0.0000000008412 0.7861 33.3333
325 1NRJ GTP 0.000000001137 0.61915 33.7349
326 4YLG GDP 0.000000009458 0.56105 33.7349
327 1YZG GDP 0.00000001169 0.52967 33.7349
328 1ZJ6 G3D 0.000000008289 0.71236 34.3373
329 5KSP GDP 0.0000001306 0.65434 37.9518
330 5KSZ GCP 0.0000001915 0.5054 37.9518
331 5KDO GDP 0.0000008433 0.57734 39.1892
332 2ZEJ GDP 0.00000176 0.53472 39.759
333 1FZQ GDP 0.0000000009142 0.77111 40.3614
334 4GOJ GNP 0.000000000008126 0.70206 40.3614
335 4ZI2 GNP 0.000000000008772 0.70059 40.3614
336 2QTV GNP 0.0000000009174 0.64788 40.3614
337 5DI3 GNP 0.0000000001594 0.72946 41.5663
338 1M2O GNP 0.0000000009256 0.65582 41.5663
339 1F6B GDP 0.00000005317 0.67326 42.1687
340 3A1S GDP 0.00000005289 0.67337 43.9759
341 1MR3 G3D 0.000000004518 0.54151 43.9759
342 1M7B GTP 0.000000000002317 0.81902 45.7831
343 1GWN GTP 0.000000000002217 0.71069 45.7831
344 1D5C GDP 0.00000000003916 0.78761 48.7654
345 3M1I GTP 0.00000000000000322 0.87958 48.7952
346 3GJX GTP 0.00000000000000544 0.87097 48.7952
347 3WYF GTP 0.000000000000007216 0.86999 48.7952
348 3GJ4 GDP 0.00000000002415 0.84941 48.7952
349 3GJ7 GDP 0.00000000002807 0.84617 48.7952
350 1Z0J GTP 0.00000000000003009 0.8415 48.7952
351 3GJ8 GDP 0.00000000002271 0.8365 48.7952
352 3WYG GTP 0.00000000000002376 0.82727 48.7952
353 3GJ5 GDP 0.00000000002825 0.60342 48.7952
354 4HAT GNP 0.000000000000001443 0.89733 49.3976
355 5UWP GNP 0.000000000000001554 0.89589 49.3976
356 5UWQ GNP 0.000000000000001443 0.89373 49.3976
357 5DHF GNP 0.000000000000001443 0.89324 49.3976
358 5UWI GNP 0.000000000000001554 0.89284 49.3976
359 5UWO GNP 0.000000000000001554 0.89278 49.3976
360 5UWR GNP 0.000000000000001554 0.89267 49.3976
361 5UWJ GNP 0.000000000000001554 0.89223 49.3976
362 5UWW GNP 0.000000000000001665 0.89164 49.3976
363 5DI9 GNP 0.000000000000002109 0.89097 49.3976
364 5UWU GNP 0.000000000000001665 0.89096 49.3976
365 5UWT GNP 0.000000000000001665 0.89085 49.3976
366 5UWH GNP 0.000000000000001998 0.88773 49.3976
367 5UWS GNP 0.000000000000002665 0.88718 49.3976
368 1YVD GNP 0.00000000000002764 0.85398 49.3976
369 1WA5 GTP 0.00000000000000433 0.8024 49.3976
370 3CH5 GDP 0.00000000005064 0.5971 49.3976
371 3GJ3 GDP 0.00000000004221 0.58263 49.3976
372 4HI0 GDP 0.000001098 0.57236 49.3976
Pocket No.: 7; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1nvv.bio2) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: 340
This union binding pocket(no: 9) in the query (biounit: 1nvv.bio4) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1UO5 PIH 0.002639 0.49053 None
2 3R35 4CO 0.0001044 0.43489 None
3 3A2Y TS5 0.002227 0.41039 1.52284
4 1WGC SIA GAL BGC 0.01419 0.4407 1.75439
5 1GEX PLP HSA 0.0003663 0.40988 1.80723
6 1Y9Q MED 0.0124 0.41717 2.08333
7 1T10 F6P 0.001771 0.44937 2.40964
8 3P3N AKG 0.01675 0.41114 2.40964
9 3OIG NAD 0.005504 0.40556 2.63158
10 1DBT U5P 0.0008612 0.4209 2.92887
11 2FOI JPA 0.0001283 0.47815 3.01205
12 1V35 NAI 0.000245 0.43656 3.01205
13 1EYE PMM 0.004817 0.41033 3.01205
14 4CCO OGA 0.01302 0.4061 3.01205
15 3OCZ SRA 0.002777 0.40694 3.05344
16 4IMG NGF 0.0008897 0.41631 3.07167
17 3I28 34N 0.0007535 0.42578 3.3264
18 4DYO SD4 0.00412 0.42239 3.3264
19 2Q2V NAD 0.000885 0.40605 3.52941
20 3F3E LEU 0.001518 0.40631 3.5343
21 2Q37 3AL 0.0002388 0.48787 3.61446
22 1XOC VAL ASP SER LYS ASN THR SER SER TRP 0.0001557 0.44179 3.61446
23 1WDA BAG 0.001648 0.43891 3.61446
24 1VDC FAD 0.0004865 0.43308 3.61446
25 1CTU ZEB 0.0008546 0.42532 3.61446
26 4IU0 ABH 0.000121 0.41455 3.61446
27 2C2A ADP 0.001819 0.41354 3.61446
28 4IXW IXW 0.008418 0.40949 3.61446
29 2FFC U5P 0.00006585 0.40875 3.61446
30 1B63 ANP 0.001363 0.40266 3.61446
31 1RYD NDP 0.002323 0.40039 3.61446
32 2HNK SAH 0.0001262 0.44519 3.76569
33 1GR0 NAD 0.008912 0.40575 3.81471
34 3F81 STT 0.001418 0.48456 3.82514
35 3FC2 IBI 0.001148 0.40112 3.8806
36 4F4S EFO 0.0008115 0.45779 3.94737
37 2HW1 ANP 0.0003054 0.40037 4.02685
38 1ZZ7 S0H 0.00166 0.44448 4.0404
39 1B4P GPS 0.001239 0.41538 4.14747
40 2GJ3 FAD 0.0002157 0.40069 4.16667
41 1XE7 GUN 0.00519 0.4556 4.21687
42 2EB5 OXL 0.002793 0.44689 4.21687
43 4E28 9MZ 0.00436 0.43802 4.21687
44 4E28 0MZ 0.004655 0.43079 4.21687
45 2RGH FAD 0.0003709 0.42954 4.21687
46 2GJN FMN 0.0001066 0.42601 4.21687
47 2BLE 5GP 0.002339 0.41841 4.21687
48 1G0N PHH 0.001846 0.40793 4.21687
49 4O8A FAD 0.0008058 0.40731 4.21687
50 3MAG 3MA 0.0001652 0.54454 4.23453
51 2XVE FAD 0.004975 0.40847 4.31034
52 1F3L SAH 0.00155 0.40085 4.36137
53 2YC5 6BC 0.0009376 0.41058 4.38596
54 2EWM NAD 0.001348 0.40037 4.41767
55 4L6C 0BT 0.0005573 0.41523 4.45545
56 1CKM GTP 0.0008132 0.45163 4.54545
57 1MZV AMP 0.001623 0.43383 4.68085
58 2ZWS PLM 0.0008089 0.51941 4.81928
59 3LZW FAD 0.00007017 0.45045 4.81928
60 3LZW NAP 0.0002678 0.45004 4.81928
61 3PLN U5P 0.001843 0.44254 4.81928
62 1Q11 TYE 0.002706 0.43539 4.81928
63 4TSK NDP 0.001157 0.42739 4.81928
64 1FL2 FAD 0.0006582 0.42145 4.81928
65 1LVL FAD 0.0009876 0.4189 4.81928
66 3K37 BCZ 0.005307 0.41605 4.81928
67 1KBJ FMN 0.0002514 0.4148 4.81928
68 1KBI PYR 0.0003736 0.41135 4.81928
69 1KBI FMN 0.0003736 0.41135 4.81928
70 3O03 NAP 0.003457 0.41107 4.81928
71 1TV5 N8E 0.002239 0.40639 4.81928
72 4WVH ASP HIS ASP ALA HIS ALA 0.01134 0.4041 4.81928
73 1D3V ABH 0.0006001 0.40343 4.81928
74 3UR0 SVR 0.003196 0.40305 4.81928
75 4TMK T5A 0.001252 0.40273 4.81928
76 2R5T ANP 0.001776 0.40243 4.81928
77 1LOR BMP 0.0002331 0.40235 4.82456
78 3QDY CBS 0.003035 0.452 4.8951
79 3QDY A2G GAL 0.004374 0.45156 4.8951
80 3QDT A2G GAL 0.01522 0.42475 4.8951
81 3TN7 NJP 0.0004071 0.41652 5.05837
82 1QJC PNS 0.003571 0.4079 5.06329
83 4C6F NCD 0.002334 0.42748 5.08906
84 4C6F DOR 0.002334 0.42748 5.08906
85 2Q1A 2KT 0.001771 0.45596 5.11945
86 3FS8 ACO 0.01224 0.40501 5.12821
87 3RF4 FUN 0.0007058 0.46039 5.17241
88 2QCX PF1 0.00633 0.42487 5.32319
89 3LTW HLZ 0.00005332 0.5256 5.35714
90 2NVK NAP 0.0003235 0.47489 5.42169
91 2QV7 ADP 0.00008226 0.46735 5.42169
92 2F2U M77 0.0005128 0.45396 5.42169
93 1M5B BN1 0.001419 0.42435 5.42169
94 4JWX 1N4 0.005493 0.42222 5.42169
95 3FC4 EDO 0.001918 0.41748 5.42169
96 1EB9 HBA 0.004372 0.41198 5.42169
97 3DGB MUC 0.005135 0.40925 5.42169
98 3NOJ PYR 0.01456 0.40636 5.42169
99 1DLJ UGA 0.004539 0.40235 5.42169
100 4W6Z 8ID 0.001764 0.40187 5.42169
101 1DLJ NAI 0.004982 0.40098 5.42169
102 3UXL CFI 0.01884 0.40005 5.48303
103 2Y6P CTP 0.002363 0.42727 5.55556
104 3F8C HT1 0.009966 0.41612 5.55556
105 1XHL NDP 0.0007139 0.41036 5.72391
106 1UXG FUM 0.001692 0.40593 5.82524
107 1UXG NAD 0.001692 0.40593 5.82524
108 2YHW BM3 0.0003385 0.4175 5.8309
109 1C1L GAL BGC 0.007628 0.43296 5.83942
110 4NTD FAD 0.0004383 0.42483 5.88235
111 2QA1 FAD 0.00006149 0.44814 6.0241
112 4OB6 S2T 0.0005666 0.43644 6.0241
113 1VE3 SAM 0.0006 0.42638 6.0241
114 2BJK NAD 0.001166 0.4244 6.0241
115 3NKS FAD 0.0004393 0.42358 6.0241
116 1ME8 RVP 0.004038 0.42032 6.0241
117 3JQ3 ADP 0.004383 0.41646 6.0241
118 3NFZ 3NF 0.003648 0.41505 6.0241
119 2IXB NAD 0.0007361 0.40853 6.0241
120 3B20 NAD 0.0004783 0.4064 6.0241
121 2P8B NSK 0.02254 0.40304 6.0241
122 4CMF PXG 0.004813 0.40149 6.0241
123 4HA6 FAD 0.00006035 0.45883 6.02911
124 3MPI GRA 0.001901 0.4176 6.04534
125 1BDB NAD 0.0008026 0.44168 6.13718
126 1HDR NAD 0.002863 0.40824 6.14754
127 2FR6 URI 0.001813 0.40959 6.16438
128 2FR6 CTN 0.002516 0.40461 6.16438
129 4IZC 1GZ 0.00454 0.40193 6.18182
130 4CS4 ANP 0.002143 0.40151 6.20438
131 2B4Q NAP 0.0005909 0.41003 6.52174
132 1SS4 CIT 0.00003196 0.63657 6.53595
133 1SS4 GSH 0.0000691 0.58739 6.53595
134 1WVC CTP 0.002749 0.42855 6.56371
135 1O9U ADZ 0.003437 0.46481 6.57143
136 1Z44 NPO 0.006301 0.46924 6.62651
137 1H82 GZZ 0.0001353 0.46196 6.62651
138 1H82 FAD 0.0001135 0.46196 6.62651
139 3I51 45C 0.0002983 0.45753 6.62651
140 3ZPG 5GP 0.004963 0.4566 6.62651
141 1KTC NGA 0.0009767 0.45435 6.62651
142 2JFV FLC 0.002454 0.44947 6.62651
143 1RYI GOA 0.0001595 0.44495 6.62651
144 1XX4 BAM 0.008301 0.41703 6.62651
145 3IU9 T07 0.002524 0.41652 6.62651
146 2O2C G6Q 0.002266 0.41422 6.62651
147 2PP3 LGT 0.004045 0.409 6.62651
148 1Z41 FMN 0.004821 0.40211 6.62651
149 1RYI FAD 0.003309 0.40161 6.62651
150 1Z44 FMN 0.006717 0.40062 6.62651
151 1Y75 NAG 0.006609 0.41386 6.77966
152 1R6D DAU 0.0005204 0.43584 6.82493
153 1R6D NAD 0.001041 0.42649 6.82493
154 1I0Z OXM 0.0002686 0.52167 6.90691
155 1XIU REA 0.000703 0.42837 6.95652
156 1LO8 4CA 0.008142 0.40103 7.0922
157 1DAK ADP 0.0000006536 0.41701 7.14286
158 4J7H TLO 0.002263 0.40622 7.21868
159 2ZJ5 ADP 0.0001444 0.49753 7.22892
160 3GTD MLI 0.0001991 0.49137 7.22892
161 2IZ1 ATR 0.00047 0.48234 7.22892
162 1SQ5 PAU 0.00246 0.43717 7.22892
163 2ZO9 MLI 0.001904 0.42853 7.22892
164 4USQ FAD 0.0009031 0.40983 7.22892
165 3FSJ D7K 0.00962 0.40225 7.22892
166 1ULE GLA GAL NAG 0.01531 0.42463 7.33333
167 1YOA FMN 0.006376 0.46895 7.54717
168 1QZZ SAM 0.003168 0.41303 7.75401
169 2Y7P SAL 0.006773 0.41831 7.79817
170 3I8P 840 0.000102 0.46391 7.83133
171 1TDF FAD 0.0001534 0.44878 7.83133
172 1TDF NAP 0.0005996 0.44616 7.83133
173 2V6O FAD 0.0009409 0.44054 7.83133
174 1C0I FAD 0.000803 0.42388 7.83133
175 1C0I BE2 0.000803 0.42388 7.83133
176 3E6J DR2 0.03207 0.418 7.83133
177 2NLI FMN 0.001795 0.41592 7.83133
178 2NLI LAC 0.001795 0.41592 7.83133
179 4K5S FAD 0.0005698 0.4148 7.83133
180 4K5S PM0 0.001825 0.4148 7.83133
181 3D2Y AH0 ALA FGA LYS 0.001305 0.41458 7.83133
182 1FIQ SAL 0.001214 0.40315 7.83133
183 1A27 NAP 0.0001127 0.43226 7.95848
184 3DAG FEG 0.0004097 0.40842 8.10056
185 2WCI GSH 0.01216 0.41228 8.14815
186 1E5F PLP 0.00297 0.40989 8.16832
187 1Y42 TYR 0.0006981 0.46059 8.43373
188 4KCT PYR 0.0006367 0.45604 8.43373
189 3O2K QRP 0.002058 0.42968 8.43373
190 3O2K DST 0.004833 0.4246 8.43373
191 2BH9 NAP 0.001909 0.41698 8.43373
192 3QV9 QV7 0.01171 0.41301 8.43373
193 2YVF FAD 0.005006 0.40769 8.43373
194 2YVF NAD 0.005278 0.40758 8.43373
195 1OMZ UD2 0.002514 0.40554 8.43373
196 4KCT FDP 0.007313 0.40324 8.43373
197 3GJB AKG 0.0007355 0.45344 8.46395
198 4K30 NLG 0.008743 0.41355 8.75
199 3FPZ AHZ 0.0004116 0.45593 9.03614
200 1T26 NAI 0.004546 0.42465 9.03614
201 1T26 GBD 0.004546 0.42465 9.03614
202 1I2B NAD 0.002009 0.41759 9.03614
203 1I2B UPG 0.002009 0.41759 9.03614
204 1I2B USQ 0.002009 0.41759 9.03614
205 3ZEI AWH 0.0003061 0.41728 9.03614
206 4JK3 NAD 0.000314 0.41694 9.03614
207 3HZS M0E 0.001445 0.41141 9.03614
208 2OFE NAG 0.01601 0.41206 9.15493
209 2WK1 SAH 0.00007788 0.44751 9.21986
210 2Y7G AAE 0.0006016 0.43548 9.21986
211 1ZS6 ADP 0.00283 0.42917 9.46746
212 2V5E SCR 0.01784 0.43532 9.5
213 3DG6 MUC 0.002335 0.41806 9.53679
214 3TKA CTN 0.001022 0.51554 9.63855
215 2WGC SIA GAL BGC 0.005945 0.47067 9.63855
216 2XDQ MGX 0.009905 0.44114 9.63855
217 2JBH 5GP 0.001985 0.43555 9.63855
218 1GSA ADP 0.002079 0.41201 9.63855
219 1JQ5 NAD 0.0248 0.40716 9.63855
220 1GSA GSH 0.002304 0.40479 9.63855
221 1MXI SAH 0.0004126 0.43206 10
222 3SHR CMP 0.0002171 0.46896 10.0334
223 1FW1 GSH 0.00135 0.42709 10.1852
224 1SB8 NAD 0.004482 0.40085 10.2273
225 1OAA OAA 0.0003339 0.43439 10.241
226 2Q8H TF4 0.01674 0.42936 10.241
227 2AQJ FAD 0.00145 0.42557 10.241
228 2AQJ TRP 0.001378 0.42557 10.241
229 2Q09 DI6 0.003765 0.42401 10.241
230 1L3I SAH 0.0001646 0.42213 10.241
231 1GJW MAL 0.003619 0.41981 10.241
232 1UF5 CDT 0.004421 0.41631 10.241
233 1E7S NAP 0.001429 0.40094 10.241
234 2EJU SAH 0.000459 0.43045 10.3175
235 1EP2 ORO 0.0004876 0.41828 10.3448
236 1EP2 FMN 0.00061 0.40652 10.3448
237 1REO FAD 0.0001778 0.4387 10.395
238 1TUV VK3 0.00738 0.44773 10.5263
239 3NYQ AMP 0.00168 0.40004 10.8108
240 2RDT FMN 0.0003559 0.44322 10.8434
241 2RDT 2RD 0.000605 0.44322 10.8434
242 3OND NAD 0.001887 0.41341 10.8434
243 3OND ADN 0.001887 0.41341 10.8434
244 1U5R ATP 0.004353 0.40375 10.8434
245 1YS4 NAP 0.0003915 0.4011 10.8434
246 3TFC PEP 0.001639 0.44473 11.1688
247 3I0O ADP 0.003912 0.41845 11.2094
248 3I0O SMI 0.01319 0.41071 11.2094
249 3MMR ABH 0.00309 0.41122 11.3801
250 2PVQ GSH 0.001993 0.41211 11.4428
251 3A1I UNU 0.0008637 0.44485 11.4458
252 1P4C FMN 0.0007275 0.44041 11.4458
253 1ZK7 FAD 0.000378 0.43473 11.4458
254 1H6W SER LEU ASN TYR ILE ILE LYS VAL LYS GLU 0.001653 0.41668 11.4458
255 1RM4 NDP 0.004072 0.41009 11.4458
256 1O6B ADP 0.002149 0.40875 11.4458
257 1QD0 RR6 0.0008478 0.43981 11.7188
258 4F8L GAL 0.006535 0.46835 11.7241
259 4COQ SAN 0.00731 0.42772 12.0482
260 3BW2 FMN 0.0001686 0.42685 12.0482
261 1R27 MGD 0.0004192 0.42297 12.0482
262 2C31 TZD 0.003979 0.41764 12.0482
263 2C31 ADP 0.003826 0.41764 12.0482
264 1QDS PGA 0.004347 0.4166 12.0482
265 2ZJF BSU 0.008684 0.40448 12.0482
266 1H9A NAP 0.001458 0.40326 12.0482
267 1LTH NAD 0.006798 0.40239 12.0482
268 3V91 UPG 0.004442 0.40098 12.0482
269 3RFV NAI 0.0009748 0.40031 12.0482
270 1LNX URI 0.004878 0.42443 12.3457
271 3KMT SAH 0.002157 0.41937 12.605
272 2Z9V PXM 0.0004215 0.46997 12.6506
273 2C5S AMP 0.003166 0.42714 12.6506
274 4R33 TRP 0.0002352 0.42687 12.6506
275 4R33 SAH 0.0002352 0.42687 12.6506
276 1SAY PYR 0.00783 0.4239 12.6506
277 1T0S BML 0.005081 0.44835 12.7907
278 2IYG FMN 0.002733 0.41996 12.9032
279 1YRX FMN 0.003932 0.40947 13.2231
280 1EDO NAP 0.00163 0.42947 13.253
281 4E13 NAD 0.0002627 0.40362 13.253
282 2O66 FLC 0.0001803 0.49327 13.3333
283 3S9K CIT 0.0002681 0.54688 13.5593
284 3P7I P7I 0.001392 0.44777 13.8554
285 2Q1S NAI 0.0006251 0.42543 13.8554
286 2GDZ NAD 0.0008298 0.40547 13.8554
287 1GU3 BGC BGC BGC BGC BGC 0.001367 0.4481 14.094
288 1JA9 NDP 0.004 0.41572 14.2336
289 1LSS NAD 0.000221 0.43248 14.2857
290 3UEC ALA ARG TPO LYS 0.0004546 0.49115 14.3836
291 4KQI NIO 0.0007121 0.40898 14.4578
292 4KQI RBZ 0.0007121 0.40898 14.4578
293 4OYA 1VE 0.01569 0.40652 14.4578
294 1EXB NDP 0.004769 0.41425 14.5631
295 4G1V FAD 0.01569 0.40524 14.787
296 2J07 FAD 0.0008647 0.42568 15.0602
297 2J07 HDF 0.0008647 0.42568 15.0602
298 2E2R 2OH 0.0009597 0.40899 15.0602
299 1BTN I3P 0.00654 0.47691 15.0943
300 1ECM TSA 0.001525 0.44031 15.5963
301 4RJK PYR 0.002726 0.4617 15.6627
302 1RZM E4P 0.004067 0.44595 15.6627
303 1H0C AOA 0.004841 0.44236 15.6627
304 1RZM PEP 0.01002 0.411 15.6627
305 1Q3Q ANP 0.003628 0.41035 15.6627
306 2Q28 ADP 0.002022 0.40416 15.6627
307 4RJK TPP 0.0003196 0.40174 15.6627
308 2RHW C0E 0.001523 0.42633 16.2544
309 1YBH FAD 0.008255 0.41223 16.8675
310 3BY8 MLT 0.001496 0.4666 17.6056
311 2FYU FDN 0.0001589 0.44655 17.8571
312 1RP0 AHZ 0.0008741 0.43901 18.0723
313 4Q3S X7A 0.00007145 0.42432 18.0723
314 4Q3R XA2 0.0004546 0.40706 18.0723
315 2E1A MSE 0.0002413 0.47351 18.6667
316 1V6A TRE 0.001785 0.44922 18.6747
317 2HMT NAI 0.0001493 0.45022 18.75
318 1N9L FMN 0.0008197 0.42165 19.2661
319 1A8S PPI 0.004722 0.41288 19.8795
320 2X61 CH 0.001207 0.40456 19.8795
321 1PEA ACM 0.0006724 0.49169 20.4819
322 1QO0 BMD 0.006553 0.4299 20.4819
323 3D3W NAP 0.0002641 0.42529 20.4918
324 1PR9 NAP 0.000581 0.41453 20.4918
325 1U7Z PMT 0.0001123 0.43696 21.2389
326 2DKH FAD 0.0005789 0.41458 21.6867
327 2DKH 3HB 0.001022 0.41413 21.6867
328 2FEQ 34P 0.0004326 0.43594 22.2222
329 4M5P MLA 0.009145 0.45098 22.3587
330 4GQB 0XU 0.002719 0.41151 22.7273
331 2QLX RM4 0.01858 0.4145 24.0741
332 4FWE FAD 0.0006069 0.42585 24.0964
333 1V5F FAD 0.006586 0.43345 24.6988
334 1V5F TPP 0.006586 0.43345 24.6988
335 2C7G FAD 0.002345 0.41609 24.6988
336 2C7G ODP 0.00258 0.41389 24.6988
337 3KJQ B94 0.001565 0.42941 25.2632
338 2PR5 FMN 0.0009665 0.41914 26.5152
339 3EE4 MYR 0.0002997 0.40066 28.3133
340 1LDM NAD 0.004614 0.41096 32.5301
Pocket No.: 10; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: 104
This union binding pocket(no: 10) in the query (biounit: 1nvv.bio3) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 1RSD PSB 0.00002114 0.45425 None
2 1MVQ MMA 0.00005216 0.45264 2.54237
3 2RHQ GAX 0.008819 0.40375 3.06122
4 4A8H PUW 0.0007442 0.4185 3.09859
5 2IMP NAI 0.00001683 0.42166 3.13152
6 4A8T PAO 0.000006511 0.41886 3.24484
7 2WL9 MBD 0.0001656 0.45839 3.61446
8 2YYJ FAD 0.0000314 0.417 3.61446
9 2YYJ 4HP 0.0000314 0.417 3.61446
10 1NJR XYL 0.001997 0.41188 3.61446
11 2R7K AMZ 0.0001796 0.40652 3.61446
12 2R7K ACP 0.0001796 0.40652 3.61446
13 1VQ2 DDN 0.0000006429 0.44025 3.62694
14 2BJF DXC 0.000006735 0.44492 3.64742
15 4IEN GDP 0.0005506 0.43179 3.68098
16 2I3G NAP 0.001004 0.41041 3.69318
17 1J2Z SOG 0.0003226 0.47609 3.7037
18 1I2L DCS 0.01362 0.40251 4.08922
19 1VCO GLN 0.0000329 0.47425 4.21687
20 1PJ6 FOL 0.000002521 0.44943 4.21687
21 4QCK ASD 0.0004792 0.43882 4.21687
22 1ZK4 NAP 0.00000327 0.43766 4.21687
23 1ZK4 AC0 0.00000327 0.43766 4.21687
24 2YP9 SIA CMO 0.004629 0.42935 4.21687
25 2GJN NIS 0.00447 0.40042 4.21687
26 4RLE 2BA 0.001667 0.40376 4.2735
27 1UGX GAL MGC 0.00001704 0.47542 4.51128
28 1K27 MTM 0.00003877 0.45309 4.59364
29 3TI8 LNV 0.0001535 0.41527 4.81013
30 1A5Z OXM 0.000005236 0.63592 4.81928
31 4MOB ADP 0.0000658 0.50396 4.81928
32 1A5Z FBP 0.00007088 0.48948 4.81928
33 1TV5 ORO 0.0006882 0.4628 4.81928
34 1SAZ ACP 0.000001033 0.4472 4.81928
35 1TV5 FMN 0.00005596 0.42145 4.81928
36 1A5Z NAD 0.00005755 0.40631 4.81928
37 4Q0A 4OA 0.01465 0.40429 4.96689
38 4FUA PGH 0.00004467 0.46982 5.11628
39 3VGL BGC 0.0000104 0.48229 5.29595
40 3VGL ANP 0.00007681 0.4288 5.29595
41 3VOZ 04A 0.00001696 0.52466 5.42169
42 1FX8 BOG 0.0001829 0.48347 5.42169
43 1AL8 FMN 0.00000708 0.42194 5.42169
44 2P2V CSF 0.00001914 0.41237 5.55556
45 4PB2 5UD 0.0002462 0.4735 6.0241
46 2Z5Y HRM 0.0000406 0.46334 6.0241
47 3B1J NAD 0.0004548 0.42665 6.0241
48 1F1V DHY 0.03808 0.40687 6.0241
49 1ONX ASP 0.00006864 0.46359 6.62651
50 1YBQ BDH 0.0002103 0.4222 6.62651
51 1XVA SAM 0.007498 0.41242 6.62651
52 1BGV GLU 0.0002529 0.41203 6.62651
53 1NYT NAP 0.005063 0.4039 6.62651
54 1N6B DMZ 0.000001866 0.40314 6.62651
55 3UC5 ATP 0.0000022 0.4162 7.00637
56 4J7H TRH 0.004035 0.42268 7.21868
57 2GGH NLQ 0.00001389 0.45585 7.22892
58 3RO7 TDR 0.000003942 0.44535 7.22892
59 1Y0L HAN 0.02976 0.44499 7.52212
60 1YOA FAD 0.00163 0.43046 7.54717
61 1SJW NGV 0.003588 0.43581 7.63889
62 5DRN 5CT 0.04552 0.43438 7.87037
63 2GN2 C5P 0.0002332 0.47926 8.43373
64 3PHQ KDO 0.02452 0.46525 8.43373
65 1X1T NAD 0.00002726 0.41239 8.43373
66 2ET1 GLV 0.0001106 0.42171 8.45771
67 2BMK PDD 0.01307 0.4456 9.03614
68 1DRV A3D 0.00000499 0.43068 9.03614
69 1JQN DCO 0.000008604 0.46904 9.63855
70 4QN6 LNV 0.00001046 0.45259 9.63855
71 1FWY UD1 0.000214 0.43068 9.63855
72 3TKA SAM 0.005326 0.41484 9.63855
73 1KYQ NAD 0.009327 0.41197 9.63855
74 1HV9 UD1 0.001017 0.41024 9.63855
75 2AHR NAP 0.001572 0.40709 9.63855
76 2W24 LYS 0.0007578 0.42262 10.241
77 3NGU ADP 0.002416 0.44714 10.596
78 3K9W ADE 0.000006237 0.44068 10.6952
79 3K9W 4PS 0.000006237 0.44068 10.6952
80 4IVG ANP 0.000001635 0.42215 10.8434
81 1YB5 NAP 0.001469 0.40049 10.8434
82 3QVL 5HY 0.000008447 0.4078 11.0204
83 4N02 FNR 0.0000004058 0.43609 11.4458
84 2C1Q BTN 0.0000002264 0.42416 11.9048
85 1EJE FMN 0.006672 0.41766 11.9792
86 1WKL ADP 0.0001697 0.40915 12.4088
87 3NKT 1HN 0.0006723 0.43052 13.253
88 4BPM GSH 0.000756 0.43207 13.4831
89 4ASJ N6A 0.001183 0.43203 13.8554
90 3C2O NTM 0.00004174 0.4195 13.9456
91 1DXY NAD 0.00008221 0.41267 14.4578
92 43CA NPO 0.04983 0.44259 15.0442
93 3DER ALA LYS 0.01268 0.40369 15.0602
94 3FW3 GLC 0.04613 0.44449 15.4135
95 1GEE NAD 0.002952 0.40113 16.2651
96 1UNB PN1 0.00005588 0.41014 17.4699
97 3KO8 NAD 0.001504 0.40511 17.4699
98 2WLT ASP 0.0005629 0.42676 18.0723
99 3OYZ ACO 0.000136 0.42337 18.0723
100 1ZFJ IMP 0.000004129 0.44555 19.2771
101 4LHM AZZ 0.01509 0.43456 20.4819
102 1VKO NAD 0.0000006549 0.40802 22.2892
103 1CFV E3G 0.0009277 0.42904 23.0089
104 4PNO U5P 0.0008446 0.46629 36.1111
Pocket No.: 11; Query (leader) PDB : 1NVV; Ligand: GNP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1nvv.bio1) has 27 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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