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Receptor
PDB id Resolution Class Description Source Keywords
1M2O 2.5 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF THE SEC23-SAR1 COMPLEX SACCHAROMYCES CEREVISIAE ZINC-FINGER BETA BARREL VWA DOMAIN GELSOLIN DOMAIN PROTTRANSPORT-SIGNALING PROTEIN COMPLEX
Ref.: STRUCTURE OF THE SEC23/24-SAR1 PRE-BUDDING COMPLEX COPII VESICLE COAT NATURE V. 419 271 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
GNP B:5200;
D:7200;
Valid;
Valid;
none;
none;
submit data
522.196 C10 H17 N6 O13 P3 c1nc2...
MG B:210;
D:210;
Part of Protein;
Part of Protein;
none;
none;
submit data
24.305 Mg [Mg+2...
ZN A:800;
C:800;
Part of Protein;
Part of Protein;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1M2O 2.5 Å NON-ENZYME: TRANSPORT CRYSTAL STRUCTURE OF THE SEC23-SAR1 COMPLEX SACCHAROMYCES CEREVISIAE ZINC-FINGER BETA BARREL VWA DOMAIN GELSOLIN DOMAIN PROTTRANSPORT-SIGNALING PROTEIN COMPLEX
Ref.: STRUCTURE OF THE SEC23/24-SAR1 PRE-BUDDING COMPLEX COPII VESICLE COAT NATURE V. 419 271 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1M2O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 175 families.
1 1M2O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 149 families.
1 1M2O - GNP C10 H17 N6 O13 P3 c1nc2c(n1[....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: GNP; Similar ligands found: 132
No: Ligand ECFP6 Tc MDL keys Tc
1 GNP 1 1
2 9GM 1 1
3 GDP 0.839506 0.973684
4 GP3 0.82716 0.948718
5 GTP 0.809524 0.973684
6 GNH 0.807229 0.986842
7 G1R 0.77907 0.961039
8 GCP 0.77907 0.948718
9 GSP 0.770115 0.925
10 5GP 0.756098 0.960526
11 G 0.756098 0.960526
12 G2R 0.747253 0.936709
13 GMV 0.747126 0.948718
14 GAV 0.714286 0.936709
15 GP2 0.712644 0.936709
16 G2P 0.711111 0.936709
17 Y9Z 0.708333 0.880952
18 GDC 0.690722 0.936709
19 GDD 0.690722 0.936709
20 GKE 0.690722 0.936709
21 G5P 0.686869 0.948718
22 GPG 0.684211 0.936709
23 GTG 0.683673 0.91358
24 GDR 0.683673 0.936709
25 GFB 0.683673 0.936709
26 JB2 0.68 0.936709
27 GKD 0.68 0.936709
28 6CK 0.676768 0.91358
29 G3A 0.676768 0.948718
30 GDX 0.673267 0.948718
31 ALF 5GP 0.67033 0.86747
32 YGP 0.663265 0.879518
33 GPD 0.656863 0.902439
34 ALF GDP 0.645833 0.86747
35 GDP AF3 0.645833 0.86747
36 GDP ALF 0.645833 0.86747
37 JB3 0.641509 0.925
38 DBG 0.640351 0.974359
39 G3D 0.638298 0.960526
40 G4P 0.625 0.960526
41 GMP 0.621951 0.857143
42 NGD 0.62037 0.936709
43 GGM 0.618182 0.925926
44 0O2 0.616162 0.960526
45 2MD 0.603604 0.870588
46 CAG 0.60177 0.904762
47 U2G 0.590909 0.91358
48 FEG 0.590909 0.858824
49 GDP 7MG 0.590476 0.888889
50 MGD 0.587719 0.870588
51 G G 0.586538 0.924051
52 ZGP 0.585586 0.848837
53 CG2 0.580357 0.91358
54 ANP 0.568421 0.922078
55 PGD 0.567797 0.902439
56 MD1 0.567797 0.870588
57 3GP 0.56044 0.922078
58 TPG 0.558333 0.822222
59 GH3 0.55 0.948052
60 FE9 0.546219 0.778947
61 GPX 0.539216 0.922078
62 G4M 0.539062 0.860465
63 DGI 0.536082 0.9
64 BGO 0.535088 0.901235
65 IDP 0.53125 0.947368
66 DGT 0.53 0.9
67 2GP 0.526882 0.935065
68 G1R G1R 0.520325 0.901235
69 GCP G 0.518868 0.897436
70 A G 0.516949 0.911392
71 U A G G 0.512605 0.911392
72 G A A A 0.504202 0.9
73 AGO 0.504202 0.91358
74 P2G 0.5 0.860759
75 G1G 0.5 0.902439
76 R7I 0.49505 0.922078
77 MGP 0.49505 0.936709
78 R5I 0.49505 0.922078
79 PGD O 0.492063 0.831461
80 6G0 0.490196 0.936709
81 P1G 0.489796 0.85
82 AKW 0.483051 0.869048
83 DG 0.474227 0.8875
84 DGP 0.474227 0.8875
85 G U 0.466667 0.878049
86 IMP 0.463918 0.934211
87 G2Q 0.462963 0.936709
88 GPC 0.459677 0.858824
89 G C 0.459016 0.878049
90 GTA 0.448276 0.91358
91 G7M 0.444444 0.924051
92 MAP 0.439252 0.898734
93 G G G RPC 0.435484 0.853659
94 B4P 0.434343 0.871795
95 AP5 0.434343 0.871795
96 ADP 0.434343 0.896104
97 A2D 0.43299 0.871795
98 AT4 0.43 0.8625
99 G G G C 0.426357 0.890244
100 AU1 0.425743 0.922078
101 SGP 0.425743 0.807229
102 BA3 0.424242 0.871795
103 A G C C 0.423077 0.888889
104 35G 0.423077 0.909091
105 PCG 0.423077 0.909091
106 C2E 0.423077 0.897436
107 APC G U 0.421875 0.864198
108 HEJ 0.421569 0.896104
109 ATP 0.421569 0.896104
110 ACQ 0.419048 0.873418
111 5GP 5GP 0.419048 0.860759
112 5FA 0.417476 0.896104
113 AQP 0.417476 0.896104
114 01G 0.417391 0.880952
115 AN2 0.415842 0.909091
116 UNP 0.415842 0.810127
117 6AD 0.415094 0.821429
118 M33 0.411765 0.860759
119 ITT 0.411765 0.846154
120 G C C C 0.410448 0.901235
121 HFD 0.409524 0.851852
122 G U34 0.408 0.86747
123 ACP 0.407767 0.873418
124 6YZ 0.407407 0.873418
125 AR6 0.403846 0.871795
126 APR 0.403846 0.871795
127 DG DG 0.403509 0.845238
128 A4P 0.403226 0.848837
129 UCG 0.402985 0.888889
130 SAP 0.4 0.851852
131 AGS 0.4 0.851852
132 AD9 0.4 0.873418
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found with APoc: 628
This union binding pocket(no: 1) in the query (biounit: 1m2o.bio2) has 26 residues
No: Leader PDB Ligand Sequence Similarity
1 1D2E GDP 2.01511
2 3MD0 GDP 2.10526
3 3FKQ ATP 2.14477
4 4ZNL BEF ADP 2.55474
5 3H86 AP5 2.60417
6 3W6G FLC 2.63158
7 6ACS CIT 3.10078
8 3EZ2 ADP 3.15789
9 1P4V GLY 3.15789
10 2XCU C5P 3.15789
11 1SKQ GDP 3.21839
12 6AIC AMP 3.27103
13 3BFV ADP 3.32103
14 1NY5 ADP 3.35917
15 2XTN GTP 3.4188
16 5ZBR ANP 3.46667
17 4Y4V DAL 3.53982
18 5LV1 78T 3.57143
19 4PX9 ADP 3.68421
20 1XX6 ADP 3.68421
21 2DPY ADP 3.68421
22 1G41 ADP 3.68421
23 1LVK MNT BEF 3.68421
24 1Z6T ADP 3.68421
25 1FNN ADP 3.68421
26 2C9O ADP 3.68421
27 5FHD ADP ALF 3.68421
28 1DNP MHF 3.68421
29 1I0B PEL 3.68421
30 3PD6 KYN 3.68421
31 5FTB ANP 3.68421
32 1QHG ATP 3.68421
33 3QPB URA 3.68421
34 4XGU ADP 3.77358
35 3ZQ6 ADP ALF 4.01235
36 1CR1 TTP 4.05405
37 1RRC ADP 4.21053
38 5BN3 ADP 4.21053
39 5MZN ADP 4.21053
40 1FP6 ADP 4.21053
41 4IOK XPO 4.21053
42 4IOK ADP 4.21053
43 2GKS ADP 4.21053
44 4E03 ADP 4.21053
45 1GOJ ADP 4.21053
46 1XP8 AGS 4.21053
47 6A20 ADP 4.21053
48 5MEX PAP 4.21053
49 1O8B ABF 4.21053
50 2NCD ADP 4.21053
51 4A4Z ANP 4.29688
52 3RWO GDP 4.32432
53 2J5V PCA 4.35967
54 2Z5F A3P 4.36242
55 1JJV ATP 4.36893
56 2D2F ADP 4.4
57 3WXM GTP 4.73684
58 5KSP GDP 4.73684
59 4LC1 GDP 4.73684
60 2IS6 ADP 4.73684
61 1DAK DPU 4.73684
62 1DAK ADP 4.73684
63 3FB4 AP5 4.73684
64 2FSH ANP 4.73684
65 4NU0 AP5 4.73684
66 1ZIN AP5 4.73684
67 1YTM ATP 4.73684
68 2GN2 C5P 4.73684
69 3BFX A3P 4.73684
70 1E2K TMC 4.73684
71 4X1B MLI 4.73684
72 1OS1 ATP 4.73684
73 4TTQ ATP 4.73684
74 1OS1 PYR 4.73684
75 4EBZ NAG NAG NAG NAG 4.73684
76 1ZUI SKM 4.7619
77 5J1J ANP 4.91228
78 4GBM A3P 4.95356
79 1AKY AP5 5
80 2BEK ATP 5.05837
81 2B99 RDL 5.12821
82 1T8U UAP SGN IDS SGN 5.14706
83 2B8W ALF 5GP 5.18293
84 1DAR GDP 5.26316
85 5YT0 GDP 5.26316
86 5FG3 GDP 5.26316
87 1SVI GDP 5.26316
88 5H7J GCP 5.26316
89 5LB3 ADP 5.26316
90 2GDJ ANP 5.26316
91 4WEI GLC GAL 5.26316
92 4FCW ADP 5.26316
93 4LJ9 ACP 5.26316
94 4YS0 ADP 5.26316
95 4PJ3 ANP 5.26316
96 1SVM ATP 5.26316
97 1WRA PC 5.26316
98 4QM7 GTP 5.26316
99 2OFW ADX 5.26316
100 3FYH ADP 5.26316
101 3LRE ADP 5.26316
102 4D81 ADP 5.26316
103 4P4T GDP 5.27778
104 5H7K GDP 5.28967
105 1W5T ANP 5.33981
106 1W5T ADP 5.33981
107 4Q1A UDP 5.35714
108 4Q1A 2XZ 5.35714
109 2CDN ADP 5.47264
110 5XKT GNP 5.5
111 3EWA ANP 5.59006
112 1V8K ANP 5.60976
113 1QF9 ADP 5.6701
114 1QF9 C5P 5.6701
115 1QF9 ALF 5.6701
116 3DKP ADP 5.71429
117 2VVG ADP 5.71429
118 1KO8 6PG 5.71429
119 1LVG ADP 5.78947
120 2WHX ADP 5.78947
121 2RCN GDP 5.78947
122 5M04 GDP 5.78947
123 5HCN GCP 5.78947
124 5Y6N ADP 5.78947
125 4LPS GDP 5.78947
126 4YJ1 ADP 5.78947
127 1U0J ADP 5.78947
128 5Z69 AGS 5.78947
129 6FAA ADP 5.78947
130 3Q9L ATP 5.78947
131 5G3Y ADP 5.78947
132 3VX3 ADP 5.78947
133 2FNA ADP 5.78947
134 1P72 ADP 5.78947
135 2WET FAD 5.78947
136 2JLR ANP 5.78947
137 5G41 AP5 5.8296
138 4ZG4 VO4 ADP 5.89005
139 1UJ2 ADP 5.95238
140 1UJ2 C5P 5.95238
141 4NE2 SH2 5.98802
142 4NE2 ADP 5.98802
143 4MKF AP5 5.99078
144 4HSE ADP 6.04534
145 1X1R GDP 6.17978
146 4U5X GNP 6.17978
147 3U6B GDP 6.31579
148 2BVN GNP 6.31579
149 4G5G GDP 6.31579
150 5JBQ GDP 6.31579
151 1D8T GDP 6.31579
152 2HCJ GDP 6.31579
153 3U6K GDP 6.31579
154 3ZFD ANP 6.31579
155 2RGX AP5 6.31579
156 5AK0 8V1 6.31579
157 4V03 ADP 6.31579
158 1G3Q ADP 6.31579
159 5I34 GDP 6.31579
160 5IRN ADP 6.31579
161 3QKT ANP 6.31579
162 3R7F CP 6.31579
163 4JLV ADP 6.3197
164 6HL7 CP 6.32184
165 5H4S RAM 6.33803
166 5U32 GDP 6.35593
167 1NJF ADP 6.4
168 1NJF AGS 6.4
169 1Y63 ADP 6.52174
170 4X8O AP5 6.54206
171 4CVN ADP 6.56934
172 1F5N GNP 6.58784
173 4QRH 0O2 6.66667
174 4GOX A3P 6.70927
175 4BQS K2Q 6.81818
176 4BQS ADP 6.81818
177 2AWN ADP 6.84211
178 3REF GDP 6.84211
179 4WZ6 ATP 6.84211
180 4YDS ATP 6.84211
181 4IEE AGS 6.84211
182 1IHU ADP 6.84211
183 1IHU AF3 6.84211
184 2O0J ADP 6.84211
185 1NN5 2DT 6.84211
186 1NN5 ANP 6.84211
187 3QXC ATP 6.84211
188 3IO3 ADP 6.84211
189 2IXE ATP 6.84211
190 5BSH PRO 6.85921
191 1RYH GNP 6.89655
192 5EXT ADP 6.92308
193 3TK1 GDP 6.9697
194 1AQU A3P 7.07071
195 1BO4 COA 7.14286
196 1QF5 GDP 7.19258
197 1QF5 RPL 7.19258
198 2PL3 ADP 7.20339
199 3IIJ ADP 7.22222
200 1E96 GTP 7.29167
201 1I4D GDP 7.29167
202 4J0Q GDP 7.36842
203 1KK1 GNP 7.36842
204 1T5C ADP 7.36842
205 3E70 GDP 7.36842
206 3WYA GDP 7.36842
207 2CE7 ADP 7.36842
208 3FWY ADP 7.36842
209 5M7P ADP 7.36842
210 1G8S MET 7.36842
211 5UAO FAD 7.36842
212 3P4X ADP 7.36842
213 5MVR ADP 7.40741
214 1MH1 GNP 7.52688
215 1YRB GDP 7.63359
216 1NST A3P 7.69231
217 5HR5 ADP 7.72128
218 1XKV ATP 7.75047
219 4ZKD GDP 7.89474
220 4RD0 GDP 7.89474
221 3T34 GDP 7.89474
222 1R0X ATP 7.89474
223 1R6B ADP 7.89474
224 4OHY ANP 7.89474
225 5LTJ BEF 7.89474
226 5VHC BEF ADP 7.89474
227 5LTJ ADP 7.89474
228 1HE1 GDP 7.95455
229 1HE1 AF3 7.95455
230 4P3Y GDP 8.24176
231 1VHT BA3 8.25688
232 4MKG AP5 8.29493
233 2QZ4 ADP 8.39695
234 2XT3 ADP 8.42105
235 5W7Q GDP 8.42105
236 2HF9 GSP 8.42105
237 1IWE IMP 8.42105
238 5XDR ADP 8.42105
239 1VKJ A3P 8.42105
240 3B7G ANP 8.42105
241 4KBF AMP 8.42105
242 3RC3 ANP 8.42105
243 2BIF SIN 8.42105
244 2BIF ANP 8.42105
245 1ION ADP 8.42105
246 3BD9 A3P 8.42105
247 5VGR GDP 8.42105
248 3VPD BUA 8.42105
249 5KUT GDP 8.46561
250 3UIE ANP 8.5
251 1G7C 5GP 8.51064
252 3SBD GNP 8.55615
253 5ZXD ATP 8.60806
254 6DEF GCP 8.69565
255 3DEF GDP 8.77863
256 2IYL GDP 8.80282
257 2FJU GSP 8.94737
258 1TQ4 GDP 8.94737
259 4H1V GNP 8.94737
260 1OYY AGS 8.94737
261 4OI4 ATP 8.94737
262 5UIV ADP 8.94737
263 2QG6 NMN 9.04523
264 1KK8 BEF ADP 9.35252
265 4PC3 GDP 9.47368
266 2OG2 MLI 9.47368
267 3B9Q MLI 9.47368
268 5L3R GCP 9.47368
269 3EC1 GDP 9.47368
270 5GVR LMR 9.47368
271 5L3V GDP 9.47368
272 1P9B GDP 9.47368
273 5WC2 ADP 9.47368
274 1IN4 ADP 9.47368
275 3TMK T5A 9.47368
276 2FAH GDP 9.47368
277 3FVQ ATP 9.47368
278 1Z83 AP5 9.47368
279 3DZD ADP 9.51087
280 5N69 ADP 9.54774
281 5W76 GDP 9.61039
282 2CBZ ATP 9.70464
283 6B4K ANP 9.76744
284 1APZ ASP 9.92908
285 2ZTS ADP 9.96016
286 1M7G AV2 10
287 2OBM ADP 10
288 1S3G AP5 10
289 4LIK CIT 10
290 2QEN ADP 10
291 1M7G ADP 10
292 1M7G ADX 10
293 3QF7 ANP 10
294 6BSX GDP 10.1124
295 6BSX E7S 10.1124
296 5DT6 GLU 10.1124
297 3BC1 GNP 10.1695
298 2WKQ GTP 10.241
299 1W0J ADP BEF 10.2941
300 1W0J ADP 10.2941
301 4IHQ ADP 10.5263
302 1UKZ ADP 10.5263
303 3RLF ANP 10.5263
304 3IUY AMP 10.5263
305 1F9V ADP 10.6628
306 2OZE AGS 10.7383
307 2GWH A3P 10.7383
308 4M7V RAR 10.8571
309 4M7V NAP 10.8571
310 2VHJ ADP 10.8761
311 2W58 ADP 10.8911
312 3VMF GTP 11.0526
313 4PPF FLC 11.0526
314 2D7D ADP 11.0526
315 4ZDJ UTP 11.0526
316 1BG2 ADP 11.0526
317 2ZR9 DTP 11.0526
318 2F9L GDP 11.0553
319 3T5G GDP 11.1842
320 4QOS ADP 11.3208
321 4BFW ZVW 11.3208
322 2J9L ATP 11.3514
323 1B7T ADP 11.5385
324 1CS4 GSP 11.5789
325 6AU6 GDP 11.5789
326 1PUJ GNP 11.5789
327 5IRR GSP 11.5789
328 3KJI ADP 11.5789
329 4O48 ASP 11.5789
330 1CM0 COA 11.9048
331 2QQ0 ANP 11.9565
332 2QQ0 ADP 11.9565
333 2QQ0 TMP 11.9565
334 1GXU 2HP 12.0879
335 2C77 GNP 12.1053
336 2C78 GNP 12.1053
337 2PZE ATP 12.1053
338 1G4U AF3 12.1053
339 1G4U GDP 12.1053
340 2XAU ADP 12.1053
341 6CS8 F9Y 12.1053
342 5H68 AGS 12.1053
343 4PSW COA 12.1053
344 5J1S ATP 12.1951
345 5JCZ GDP 12.2905
346 4LX0 BEF GDP 12.4294
347 4KFU ACP 12.6316
348 5GOE GDP 12.6316
349 4R2I ANP 12.6316
350 3A4M ADP 12.6316
351 5BQ5 ADP BEF 12.6984
352 4C4P GNP 12.7168
353 2HV8 GTP 12.7907
354 2KIN ADP 13
355 2CJW GDP 13.1579
356 5TSH ANP 13.1579
357 5TSH ADP 13.1579
358 3BOS CDP 13.1579
359 2GK6 ADP 13.1579
360 2ZPA ADP 13.1579
361 4KVA GTP 13.1579
362 1XMV ADP 13.1579
363 4AG5 ADP 13.1579
364 4R43 GDP 13.1579
365 2D7C GTP 13.1737
366 1F2U ATP 13.5135
367 2ZEJ GDP 13.587
368 6G14 G4P 13.6842
369 4WZA ACP 13.6842
370 4WZA ADP 13.6842
371 5L3S GNP 13.6842
372 4IDN GNP 13.6842
373 5L3W GDP 13.6842
374 2Q2Y ADP 13.6842
375 2Q2Y MKR 13.6842
376 5L3S G 13.6842
377 3UG4 AHR 13.6842
378 4WOP CTP 13.7778
379 3Q72 GNP 13.8554
380 2CK3 ANP 14
381 2CK3 ADP 14
382 3BER AMP 14.0562
383 5I0H ADP BEF 14.2105
384 1YQT ADP 14.2105
385 3DC4 ADP 14.2105
386 2HT6 GDP 14.3678
387 1DS6 GDP 14.5833
388 3ZIA ADP 14.7368
389 3ZIA ATP 14.7368
390 4RZ3 ADP 14.7368
391 2W2X GSP 15.1351
392 2V7Q ADP 15.1515
393 2V7Q ATP 15.1515
394 1MKY GDP 15.2632
395 3CNL GNP 15.2632
396 2VB6 ADP BEF 15.2632
397 4PFO ADP 15.2632
398 6C90 ADP 15.3846
399 5WRI A3P 15.625
400 4LYA ATP 15.7895
401 2YOH WMJ 15.7895
402 1TL2 NDG 15.7895
403 3N29 GOL 15.7895
404 1W7J ADP BEF 15.894
405 3KTA AP5 15.9341
406 5W7B MYR 16.3121
407 2XTZ GSP 16.3158
408 3ZS9 ADP ALF 16.3158
409 2WOJ ADP ALF 16.3158
410 5IFS ADP 16.3158
411 5ZB0 TYD 16.3158
412 5ZB0 ADP 16.3158
413 1SQ5 ADP 16.3158
414 3HU3 AGS 16.3158
415 5KSZ GCP 16.8421
416 3TBK ANP 16.8421
417 5W75 GDP 17.3684
418 1HTW ADP 17.7215
419 4NCN GTP 17.8947
420 4TMZ GSP 17.8947
421 2CHG ANP 17.8947
422 5CK5 GDP 18.3544
423 3BY9 SIN 18.4615
424 4HI0 GDP 18.9474
425 1GOT GDP 18.9474
426 1WDT GTP 19.4737
427 1G6O ADP 19.4737
428 1OFH ADP 19.5402
429 5OEC GDP 19.6721
430 1GWN GTP 20
431 5K5Z ANP 20
432 2QN6 GDP 20.4301
433 2ODE ALF GDP 20.5263
434 1TAD ALF 20.5263
435 1TAD GDP 20.5263
436 1SVK ALF GDP 20.5263
437 1K6M AGS 20.5263
438 1M7B GTP 20.6522
439 6B8B ADP 20.8835
440 1FQJ ALF 21.5789
441 1FQJ GDP 21.5789
442 1FQK GDP 21.5789
443 1FQK ALF 21.5789
444 3NHB ADP 21.5789
445 2VOH CIT 21.6561
446 3WY9 GDP 21.875
447 4DCT GDP 22.1053
448 4QDI ATP 22.1053
449 3H4S ADP 22.1053
450 4FRZ ADP 22.1053
451 3CX8 GSP 22.6316
452 1ZCB GDP 22.6316
453 3AB3 GDP 22.6316
454 1H65 GDP 22.6316
455 2OM2 GDP 23.6842
456 1Y3A GDP 23.6842
457 1BH2 GSP 24.2105
458 1RJ9 GCP 24.2105
459 5KDO GDP 24.2105
460 3Q85 GNP 24.2604
461 5WDR GNP 24.5614
462 2EW1 GNP 24.7368
463 3T12 GDP ALF 24.7368
464 1G7S GDP 24.7368
465 3T1O GDP 24.7368
466 2EFE GNH 24.8619
467 3GJ5 GDP 25.2632
468 3GJ4 GDP 25.2632
469 3GJ7 GDP 25.2632
470 5LEF GTP 25.2632
471 3M1I GTP 25.2632
472 3WYF GTP 25.2632
473 4DKX GDP 25.2632
474 3GJ8 GDP 25.2632
475 3GJ3 GDP 25.2632
476 3GJ0 GDP 25.2632
477 4XTR ATP 25.2632
478 4XVU ATP 25.2632
479 4XTR ADP 25.2632
480 2BME GNP 25.2688
481 3E5H GNP 25.2809
482 4HDO GNP 25.7485
483 4HDQ GNP 25.7485
484 3X1Z GNP 25.7485
485 4B47 GDP 25.7895
486 4KVG GTP 26.1905
487 3WYG GTP 26.3736
488 2Y8E GNP 26.8156
489 2J0V GDP 26.8868
490 1GUA GNP 27.1605
491 5BXQ GDP 27.3684
492 5UWH GNP 27.3684
493 4HAT GNP 27.3684
494 5UWI GNP 27.3684
495 5DIF GNP 27.3684
496 5UWP GNP 27.3684
497 5UWW GNP 27.3684
498 5UWT GNP 27.3684
499 5UWR GNP 27.3684
500 5UWU GNP 27.3684
501 6CIT GNP 27.3684
502 5UWQ GNP 27.3684
503 5DHF GNP 27.3684
504 1IBR GNP 27.3684
505 3GJX GTP 27.3684
506 5DI9 GNP 27.3684
507 3CH5 GDP 27.3684
508 4D0G GTP 27.5362
509 5SZH GNP 27.8947
510 3RAB GNP 28.4024
511 3TKL GTP 28.4211
512 2GJ8 ALF GDP 28.4884
513 2PEZ DAT 28.4916
514 2PEZ GGZ 28.4916
515 2G77 GDP 28.9474
516 3CPJ GDP 28.9474
517 2G77 AF3 28.9474
518 3SFV GDP 29.2818
519 6CRK GDP 29.5775
520 1GP2 GDP 29.5775
521 5UWO GNP 30
522 2Y65 ADP 30
523 3NKV GNP 30.2857
524 1WF3 GNP 30.5263
525 3PQC GDP 30.5263
526 1G16 GDP 30.5882
527 1D5C GDP 30.8642
528 2A9K GDP 31.016
529 3QBT GNP 31.0345
530 3TNF GNP 31.0345
531 4LHW GNP 31.0345
532 1EK0 GNP 31.1765
533 2FFQ GSP 31.5789
534 1KAO GDP 31.7365
535 5Z2M GTP 31.8182
536 1A4R GDP 32.1053
537 1A4R GNH 32.1053
538 1GRN AF3 32.1053
539 1NF3 GNP 32.1053
540 1GRN GDP 32.1053
541 4ITR GDP 32.1053
542 2WMO GTP 32.1053
543 2NGR GDP 32.1053
544 4DID GDP 32.1053
545 2NGR AF3 32.1053
546 2FH5 GTP 32.6316
547 5UPK GNP 32.973
548 1ZC3 GNP 33.1429
549 1UAD GNP 33.1429
550 4YC7 GNP 33.7017
551 1X6V ADP 34.2105
552 1U8Z GDP 34.5238
553 1KY3 GDP 34.6154
554 5XC5 GTP 35.7955
555 2GCO GNP 36.3158
556 5JCP GDP ALF 36.3158
557 2GCN GDP 36.3158
558 1OW3 GDP 36.3158
559 5UQW GDP 37.037
560 5IRC GDP 37.0968
561 4D0N GDP 37.2973
562 6BCB GSP 37.2973
563 6BCA GSP 37.2973
564 6BC0 GSP 37.2973
565 5HPY GDP 37.2973
566 1TU3 GNP 37.4269
567 1KMQ GNP 37.5
568 5OCG GNP 37.5661
569 5TB5 GDP 37.8378
570 5TAR GDP 37.8378
571 1CXZ GSP 37.9121
572 3MJH GTP 38.0952
573 4XOI GTP 38.3333
574 5O74 GDP 38.3333
575 3LXR GDP 38.3784
576 4XSH GSP 38.5475
577 5YV5 ADP 38.8889
578 1TX4 ALF GDP 38.9831
579 2C5L GTP 39.3064
580 4K81 GTP 39.7661
581 5E95 GDP 40.4762
582 1LFD GNP 40.7186
583 6BVJ GNP 40.7186
584 5UWS GNP 40.9091
585 3DDC GNP 40.9639
586 2UZI GTP 40.9639
587 1CLU DBG 40.9639
588 1WQ1 GDP 40.9639
589 3KUD GDP 40.9639
590 1WQ1 AF3 40.9639
591 6FA4 GNP 41.0405
592 3DOE GTP 41.0526
593 6D5E GNP 41.3174
594 6BVI GNP 41.3174
595 6D5H GNP 41.3174
596 6BVL GNP 41.3174
597 6D59 GNP 41.3174
598 6D55 GNP 41.3174
599 6BVK GNP 41.3174
600 6D56 GNP 41.3174
601 6D5L GNP 41.3174
602 6D5J GNP 41.3174
603 6D5G GNP 41.3174
604 6D5V GNP 41.3174
605 6BVM GNP 41.3174
606 6D5M GNP 41.3174
607 5O2T GSP 41.4201
608 1NVV GNP 41.5663
609 4M9Q GNP 41.5789
610 5WRJ A3P 41.6667
611 5WLB GNP 42.1687
612 1KSH GDP 43.0108
613 4ZI2 GNP 43.1579
614 4GOJ GNP 43.3862
615 2A5F GTP 45.1429
616 1FZQ GDP 45.3039
617 3PCR GTP 46.2963
618 4BAS GNP 46.3158
619 2J59 GTP 46.3855
620 2W83 GTP 46.6667
621 5UWJ GNP 46.6667
622 4KAX GTP 47.3373
623 3N5C GDP 47.5309
624 3AQ4 GDP 47.8261
625 1UPT GTP 47.9532
626 1MR3 G3D 48.0663
627 5DI3 GNP 48.1081
628 2X77 GDP 49.7355
Pocket No.: 2; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found with APoc: 42
This union binding pocket(no: 2) in the query (biounit: 1m2o.bio3) has 25 residues
No: Leader PDB Ligand Sequence Similarity
1 4DDY DN6 3.15789
2 3IWK NAD 3.68421
3 4F2Q QUS 3.87597
4 3ITJ CIT 4.14201
5 5MB4 NDG 4.2394
6 1VMK GUN 4.73684
7 4TL6 ANP 4.74308
8 3VM7 GLC 5.0813
9 2ZJ1 NAD 5.26316
10 2ZJ1 ARJ 5.26316
11 5E5U MLI 5.52764
12 2HK9 ATR 6.18182
13 4PU6 ASP 6.31579
14 1ZGS XMM 6.31579
15 5NM7 GLY 6.76692
16 3LN9 FLC 7.19424
17 5M67 NAD 7.36842
18 5M67 3D1 7.36842
19 1K7T NAG GAL 7.52688
20 3QVV A3P 7.79661
21 1V6A TRE 7.89474
22 4JLS 3ZE 7.89474
23 1XEX ATP 9.30233
24 6H5E ANP 9.47368
25 1XPJ TLA 9.52381
26 3FIU POP 10.0402
27 1GVF PGH 10.5263
28 4C25 13P 10.5263
29 3CV2 OXL 10.7143
30 5TIV A3P 11.0672
31 5H67 ATP 11.25
32 4PVR ASP 11.5789
33 2QQ0 THM 11.9565
34 3KIF GDL 12.2642
35 5C2N NAG 12.5
36 3R4Z GLA 13.1579
37 2ZJ5 ADP 13.1579
38 2F5X ASP 13.4615
39 2IL4 COA 13.5922
40 1SW1 PBE 13.6842
41 3KIH GDL 14.433
42 1QHH ATP 18.315
Pocket No.: 3; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1m2o.bio1) has 25 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1M2O; Ligand: GNP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1m2o.bio1) has 26 residues
No: Leader PDB Ligand Sequence Similarity
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