Receptor
PDB id Resolution Class Description Source Keywords
1LRH 1.9 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF AUXIN-BINDING PROTEIN 1 IN COMPLEX WITH NAPHTHALENE ACETIC ACID ZEA MAYS BETA JELLYROLL DOUBLE STRANDED PARALLEL BETA HELIX GERMIN PROTEIN PROTEIN BINDING
Ref.: CRYSTAL STRUCTURE OF AUXIN-BINDING PROTEIN 1 IN COM AUXIN. EMBO J. V. 21 2877 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
NAG NAG BMA MAN MAN MAN A:181;
B:181;
C:181;
D:181;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
n/a n/a
NLA A:5190;
B:6190;
C:7190;
D:8190;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
Kd = 0.15 uM
186.207 C12 H10 O2 c1ccc...
ZN A:180;
B:180;
C:180;
D:180;
Part of Protein;
Part of Protein;
Part of Protein;
Part of Protein;
none;
none;
none;
none;
submit data
65.409 Zn [Zn+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1LRH 1.9 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF AUXIN-BINDING PROTEIN 1 IN COMPLEX WITH NAPHTHALENE ACETIC ACID ZEA MAYS BETA JELLYROLL DOUBLE STRANDED PARALLEL BETA HELIX GERMIN PROTEIN PROTEIN BINDING
Ref.: CRYSTAL STRUCTURE OF AUXIN-BINDING PROTEIN 1 IN COM AUXIN. EMBO J. V. 21 2877 2002
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 544 families.
1 1LRH Kd = 0.15 uM NLA C12 H10 O2 c1ccc2c(c1....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 420 families.
1 1LRH Kd = 0.15 uM NLA C12 H10 O2 c1ccc2c(c1....
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 319 families.
1 1LRH Kd = 0.15 uM NLA C12 H10 O2 c1ccc2c(c1....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: NLA; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 NLA 1 1
2 Q5M 0.415094 0.772727
3 3N4 0.413793 0.708333
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1LRH; Ligand: NLA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1lrh.bio2) has 16 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 2; Query (leader) PDB : 1LRH; Ligand: NLA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1lrh.bio2) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1LRH; Ligand: NLA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1lrh.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1LRH; Ligand: NLA; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 4) in the query (biounit: 1lrh.bio1) has 15 residues
No: Leader PDB Ligand Sequence Similarity
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