-->
Receptor
PDB id Resolution Class Description Source Keywords
1LNX 2.05 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF THE P.AEROPHILUM SMAP1 HEPTAMER IN A NE FORM (C2221) PYROBACULUM AEROPHILUM BETA BARREL-LIKE STRUCTURE (OB FOLD); HOMOHEPTAMERIC RNA BIPROTEIN TRANSCRIPTION
Ref.: THE OLIGOMERIZATION AND LIGAND-BINDING PROPERTIES O ARCHAEAL PROTEINS (SMAPS) PROTEIN SCI. V. 12 832 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ACY C:8102;
D:8101;
Invalid;
Invalid;
none;
none;
submit data
60.052 C2 H4 O2 CC(=O...
GOL A:8209;
B:8202;
C:8208;
D:8207;
E:8204;
E:8205;
E:8210;
F:8203;
F:8206;
G:8201;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
Invalid;
none;
none;
none;
none;
none;
none;
none;
none;
none;
none;
submit data
92.094 C3 H8 O3 C(C(C...
URI A:8003;
B:8004;
D:8005;
D:8006;
E:8007;
F:8001;
G:8002;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
none;
none;
none;
submit data
244.201 C9 H12 N2 O6 C1=CN...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1LNX 2.05 Å NON-ENZYME: TRANSCRIPT_TRANSLATE CRYSTAL STRUCTURE OF THE P.AEROPHILUM SMAP1 HEPTAMER IN A NE FORM (C2221) PYROBACULUM AEROPHILUM BETA BARREL-LIKE STRUCTURE (OB FOLD); HOMOHEPTAMERIC RNA BIPROTEIN TRANSCRIPTION
Ref.: THE OLIGOMERIZATION AND LIGAND-BINDING PROPERTIES O ARCHAEAL PROTEINS (SMAPS) PROTEIN SCI. V. 12 832 2003
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 291 families.
1 1LNX - URI C9 H12 N2 O6 C1=CN(C(=O....
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 247 families.
1 1LNX - URI C9 H12 N2 O6 C1=CN(C(=O....
50% Homology Family (2)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 209 families.
1 1LNX - URI C9 H12 N2 O6 C1=CN(C(=O....
2 1LOJ - U C9 H13 N2 O9 P C1=CN(C(=O....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: URI; Similar ligands found: 91
No: Ligand ECFP6 Tc MDL keys Tc
1 URI 1 1
2 CJB 0.895833 0.949153
3 DKX 0.709091 0.857143
4 2TU 0.666667 0.888889
5 U5P 0.661017 0.848485
6 U 0.661017 0.848485
7 U4S 0.65 0.833333
8 U3P 0.644068 0.833333
9 UA3 0.644068 0.833333
10 U3S 0.629032 0.833333
11 U2S 0.629032 0.848485
12 UDP 0.625 0.863636
13 44P 0.603175 0.826087
14 UPU 0.6 0.863636
15 UTP 0.597015 0.863636
16 U2P 0.590164 0.848485
17 UDP UDP 0.575758 0.861538
18 2KH 0.565217 0.838235
19 UUA 0.561404 0.864407
20 ZEB 0.553571 0.966102
21 GDU 0.552632 0.865672
22 UPG 0.552632 0.865672
23 660 0.552632 0.852941
24 URM 0.552632 0.852941
25 GUD 0.552632 0.865672
26 UFM 0.552632 0.865672
27 UNP 0.549296 0.838235
28 Y6W 0.545455 0.816901
29 N3E 0.544118 0.835821
30 DHZ 0.534483 0.966102
31 U2F 0.531646 0.816901
32 UPF 0.531646 0.816901
33 UMF 0.53125 0.757143
34 U1S 0.527027 0.8
35 BRD 0.525424 0.915254
36 UVC 0.515625 0.782609
37 UFG 0.5125 0.816901
38 DUR 0.508475 0.903226
39 CTN 0.5 0.919355
40 5UD 0.5 0.920635
41 AR3 0.5 0.919355
42 UPP 0.5 0.838235
43 UDH 0.5 0.794521
44 URD 0.491525 0.881356
45 CTD 0.491525 0.9
46 CSQ 0.488372 0.780822
47 UDM 0.488372 0.84058
48 CSV 0.488372 0.780822
49 3UC 0.488095 0.816901
50 U U 0.481481 0.823529
51 UD1 0.477273 0.852941
52 UD2 0.477273 0.852941
53 UAD 0.47561 0.838235
54 UDX 0.47561 0.838235
55 USQ 0.464286 0.730769
56 UGA 0.464286 0.850746
57 UGB 0.464286 0.850746
58 GPQ 0.460317 0.875
59 G3N 0.458824 0.814286
60 PUP 0.457831 0.811594
61 GPK 0.453125 0.875
62 GPU 0.446154 0.875
63 6SY 0.43662 0.80597
64 0YQ 0.435897 0.835821
65 EPZ 0.428571 0.84058
66 U U U U 0.426829 0.808824
67 UM3 0.426471 0.782609
68 D1M 0.426471 0.903226
69 12V 0.425532 0.828571
70 HWU 0.425532 0.828571
71 D1J 0.424658 0.848485
72 EPU 0.424242 0.828571
73 EEB 0.424242 0.828571
74 A U 0.424242 0.76
75 UTP U U U 0.421687 0.818182
76 UD7 0.419355 0.826087
77 HP7 0.419355 0.838235
78 G U34 0.415842 0.7125
79 G U 0.415842 0.721519
80 MJZ 0.414894 0.814286
81 5AE 0.412698 0.887097
82 F5G 0.410526 0.826087
83 F5P 0.410526 0.814286
84 UD4 0.410526 0.814286
85 DU 0.408451 0.771429
86 UMP 0.408451 0.771429
87 UP5 0.408163 0.76
88 DDU 0.403226 0.793651
89 IUG 0.402062 0.721519
90 4TC 0.4 0.74026
91 DUS 0.4 0.701299
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 148
This union binding pocket(no: 1) in the query (biounit: 1lnx.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 4YV5 SVR None
2 1PZO CBT None
3 5E50 ALA TYR ASP GLU SEP TPO ASP GLU GLU None
4 1Z0S ATP None
5 2VZZ SCA None
6 1JQ9 PHE LEU SER TYR LYS None
7 6GL8 F3Q None
8 2GJ3 FAD None
9 2VVT I24 None
10 5G3N X28 None
11 2WET FAD None
12 4WZV E40 None
13 1Z83 AP5 None
14 1SUW NAP None
15 2PRG BRL None
16 3WDM ADN None
17 5TWO 7MV None
18 2AK3 AMP None
19 2W3O TYR ALA GLY SEP TPO ASP GLU ASN None
20 1V1A KDG None
21 1X1R GDP None
22 6GG9 FMN None
23 4C5N ACP None
24 2WG9 OCA None
25 4QAR ADE None
26 4INB 1F6 None
27 4HIA FMN None
28 2W83 GTP None
29 3EE4 MYR None
30 3P7N FMN None
31 1A4R GDP None
32 1IYK MYA None
33 4BNU 9KQ None
34 5O96 SAM None
35 2HFP NSI None
36 2BMZ XLM None
37 1NHZ 486 2.46914
38 3WV1 WHH 2.46914
39 5LYH 7B8 2.46914
40 4MKF AP5 2.76498
41 2RGX AP5 3.7037
42 4KCF AKM 3.7037
43 2VBF TPP 3.7037
44 5J47 6JJ 3.7037
45 3QVL 5HY 3.7037
46 3COW 52H 3.7037
47 2HK9 NAP 3.7037
48 4X8O AP5 3.7037
49 4OIV XX9 3.7037
50 2B96 ANN 3.7037
51 1USF NAP 3.7037
52 2OKL BB2 3.7037
53 5K04 COA 4.93827
54 1QNF HDF 4.93827
55 5LU5 M7P 4.93827
56 1ZC3 GNP 4.93827
57 3ULK NDP 4.93827
58 4QRH 0O2 4.93827
59 3OZ2 OZ2 4.93827
60 3SE5 ANP 4.93827
61 1VG8 GNP 4.93827
62 3ET1 ET1 4.93827
63 1VLH PNS 6.17284
64 1UU1 PMP HSA 6.17284
65 2EG7 OTD 6.17284
66 3RO7 TDR 6.17284
67 3RS8 APR 6.17284
68 2J07 FAD 7.40741
69 2J07 HDF 7.40741
70 2HMT NAI 7.40741
71 4FC7 NAP 7.40741
72 4FC7 COA 7.40741
73 1EC9 XYH 7.40741
74 2F59 INI 7.40741
75 3TGE TGE 7.40741
76 3B6C SDN 7.40741
77 5APK 76E 8.64198
78 4PVR ASP 8.64198
79 2YNC YNC 8.64198
80 6F97 FAD 8.64198
81 2Z6D FMN 8.64198
82 4KIB SAH 8.64198
83 1F0X FAD 9.87654
84 3LDW ZOL 9.87654
85 2Z7I 742 9.87654
86 5TO8 7FM 9.87654
87 1E5Q NDP 9.87654
88 4PA0 2OW 9.87654
89 1UPT GTP 9.87654
90 5G5G FAD 11.1111
91 5XFV FMN 11.1111
92 1FIQ FAD 12.3457
93 1ZD9 GDP 12.3457
94 3NRZ FAD 12.3457
95 3ZLR X0B 12.3457
96 4HBM 0Y7 12.5
97 1KNR FAD 13.5802
98 1QF9 ADP 13.5802
99 1QF9 C5P 13.5802
100 1QF9 ALF 13.5802
101 4ZOA IFM 13.5802
102 4GE6 B26 13.5802
103 4R38 RBF 13.5802
104 3LSJ COA PLM 14.8148
105 3LSJ PLM COA 14.8148
106 3B50 SLB 14.8148
107 2H92 C5P 14.8148
108 4OAS 2SW 15.625
109 3KMZ EQO 16.0494
110 1IHU ADP 16.0494
111 1IHU AF3 16.0494
112 1M13 HYF 16.0494
113 2ZRU FMN 16.0494
114 2IVF MD1 16.0494
115 3AI7 TPP 16.0494
116 1NVM NAD 16.0494
117 4LWU 20U 16.0494
118 4WT2 3UD 17.284
119 2X24 X24 17.284
120 4OGN 2U5 17.284
121 5EYP LOC 17.284
122 2V6G NAP 18.5185
123 1JV1 UD1 18.5185
124 2Q2Y MKR 19.7531
125 2Q2Y ADP 19.7531
126 5IVX ARG GLY PRO GLY ARG ALA PHE VAL THR ILE 19.7531
127 5D2H AKG 19.7531
128 2J59 GTP 19.7531
129 5ZM0 FAD 20.9877
130 1RV1 IMZ 20.9877
131 1IID NHM 22.2222
132 6DIO NAD 22.2222
133 5UC1 486 23.4568
134 1QM5 PLP 23.4568
135 1JZS MRC 23.4568
136 5MW4 5JU 23.4568
137 1E8G FAD 24.6914
138 1E8G FCR 24.6914
139 2OGA PGU 24.6914
140 4XRQ 1B0 24.6914
141 1UKZ AMP 24.6914
142 1KDO C 24.6914
143 2Q0D ATP 25.9259
144 3WCA FPS 25.9259
145 1SR7 MOF 25.9259
146 2FV5 541 25.9259
147 3QKD HI0 27.1605
148 5NTW 98N 45
Pocket No.: 2; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 66
This union binding pocket(no: 2) in the query (biounit: 1lnx.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 2RIF AMP None
2 1S8G DAO None
3 4PXD 1AL None
4 4ZBR NPS None
5 4ZBR DIF None
6 3F3E LEU None
7 3N0Y APC None
8 5Y80 IRE None
9 1VP5 NAP None
10 2OBF F83 2.46914
11 5AB7 MLC 2.46914
12 2DX7 CIT 3.7037
13 1PS9 FAD 3.7037
14 3CR3 ADP 3.7037
15 4Y8D 49J 3.7037
16 2YG2 S1P 3.7037
17 3RMK BML 4.93827
18 1CX4 CMP 6.17284
19 3C8Z 5CA 6.17284
20 3PNL ADP 6.17284
21 5CSD ACD 6.17284
22 4AFH L0B 6.17284
23 3VET TOY 7.40741
24 4ZLU ADP 7.40741
25 4ZLU 4PW 7.40741
26 6ECW SAH 7.40741
27 4D86 ADP 7.40741
28 4EKQ NPO 8.64198
29 2DW7 SRT 8.64198
30 5TC4 NAD 8.64198
31 3NGL NAP 9.87654
32 1DIG NAP 9.87654
33 5NWD 9C8 9.87654
34 1GNI OLA 9.87654
35 2V0U FMN 9.87654
36 2XCU C5P 9.87654
37 4C12 ADP 11.1111
38 1MRH FMC 11.1111
39 1GVE NAP 11.1111
40 1T3Q FAD 11.1111
41 4BUY F37 12.3457
42 1LRW PQQ 12.3457
43 5A7Y SAH 12.3457
44 3IES M24 12.3457
45 1HKK NAA NAA AMI 12.3457
46 1RM6 FAD 13.5802
47 1WTC ACP 13.5802
48 4XH4 PPI 13.5802
49 4XH4 ANP 13.5802
50 2ZOF BES 14.8148
51 1MGP PLM 14.8148
52 1J1R ADE 14.8148
53 1GQ2 NAP 14.8148
54 1VPV PLM 14.8148
55 2DFV NAD 16.0494
56 6EMU SAM 16.0494
57 3RM4 3RM 16.0494
58 3TDV GDP 18.5185
59 3B9A NAG NAG NAG NAG NAG NAG 20.9877
60 5HWK BEZ 22.2222
61 1AUX AGS 23.4568
62 5OES ADP 27.1605
63 4P53 NAI 29.6296
64 3DRW AMP 34.5679
65 2GQS C2R 38.2716
66 4UHL VFV 39.5062
Pocket No.: 3; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 127
This union binding pocket(no: 3) in the query (biounit: 1lnx.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 6ALW BNV None
2 6ALW BMJ None
3 5ML3 DL3 None
4 4XU6 TDA None
5 2H9E DTY ILE ARG LEU LPD None
6 5VEG FMN None
7 6AMI TRP None
8 4PVV HO4 None
9 4IS0 1R4 None
10 5CLO NS8 None
11 1NJF AGS None
12 1XKQ NDP None
13 3X01 AMP None
14 3DCM SAM None
15 2E1A MSE None
16 1XG5 NAP None
17 3FUU ADN None
18 1A4R GNH None
19 1N5S ADL None
20 2BOG MGL SGC BGC BGC None
21 3VZS NAP None
22 1Q3A NGH None
23 3T7S SAM None
24 1NJF ADP None
25 2WTX VDO 2.46914
26 2WTX UDP 2.46914
27 1BVY FMN 2.46914
28 4MKG AP5 2.76498
29 2VL8 CTS 3.7037
30 2VL8 UDP 3.7037
31 3GFB NAD 3.7037
32 1LBT T80 3.7037
33 6ADI 9UO 3.7037
34 5UAO FAD 3.7037
35 1IV2 CDP 3.7037
36 4YAG NAI 3.7037
37 3O7B SAH 4.93827
38 4X9X OLA 4.93827
39 2NPA MMB 4.93827
40 3ZLM ANP 4.93827
41 5YSS NAD 4.93827
42 3CU0 GAL GAL SO4 4.93827
43 5KAU RHQ 4.93827
44 2AQJ TRP 6.17284
45 2AQJ FAD 6.17284
46 4AVO BGC BGC BGC BGC BGC BGC 6.17284
47 1S17 GNR 6.17284
48 3ROE THM 6.17284
49 3DZT EAH 7.40741
50 1KGQ NPI 7.40741
51 1KGQ SCO 7.40741
52 1G27 BB1 7.40741
53 5LUN ARG 7.40741
54 5LUN OGA 7.40741
55 2APC UDM 7.40741
56 1BW9 PPY 7.40741
57 2YNE NHW 8.64198
58 2YNE YNE 8.64198
59 1AKY AP5 8.64198
60 2ZCQ B65 8.64198
61 4M7T SAM 8.64198
62 1XSE NDP 8.64198
63 2QG6 NMN 8.64198
64 1VCE SAH 8.64198
65 5JE8 NAD 8.64198
66 3TA2 ATP 8.64198
67 4UWJ MYA 9.87654
68 4UWJ 7L5 9.87654
69 2DYR PGV 9.87654
70 5Z84 PGV 9.87654
71 3BQ5 HCS 9.87654
72 2V0C LEU LMS 9.87654
73 3EPO MP5 9.87654
74 5W5R PYR 9.87654
75 2E9L PLM 9.87654
76 6C7D EOJ 9.87654
77 2BVL UDP 11.1111
78 2BVL GLC 11.1111
79 5AE2 FAD 11.1111
80 2C78 PUL 11.1111
81 3TN7 NJP 11.1111
82 3U4C NDP 11.1111
83 3WB0 FEG 11.1111
84 6BA2 7KM 11.1111
85 2GAG FAD 12.3457
86 2GAG FOA 12.3457
87 5WGR PM7 12.3457
88 1RIW OSC 12.3457
89 2FES 3SP 12.3457
90 1T9D PYD 12.3457
91 5MU6 KFK 13.5802
92 5MU6 MYA 13.5802
93 4Y30 SAH 13.5802
94 4WVO 3UZ 14.8148
95 5TWJ SAM 14.8148
96 1GUZ NAD 14.8148
97 6BWL NAD 14.8148
98 4ZFL 4NK 14.8148
99 1N1G BCP 14.8148
100 3K9U ACO 14.8148
101 3FYS PLM 14.8148
102 4PGK Y69 16.0494
103 4ORM 2V6 16.0494
104 4ORM ORO 16.0494
105 4ORM FMN 16.0494
106 6C4N NAP 16.0494
107 5OF9 ANP 16.0494
108 2J1P GRG 16.0494
109 3P0K FAD 16.0494
110 1RP7 TZD 17.284
111 2W41 ADP 18.5185
112 2EW5 Y12 18.5185
113 1PR9 NAP 18.5185
114 1YZN GNP 18.5185
115 4XOI GTP 19.7531
116 1KOL NAD 19.7531
117 2IBZ SMA 19.7531
118 4C2X NHW 20.9877
119 1UKZ ADP 24.6914
120 1RX0 2MC 24.6914
121 5UQK U2F 27.1605
122 3WBF API 30.8642
123 4IPE ANP 30.8642
124 2QZS 250 32.0988
125 2QZS GLC 32.0988
126 2QZS ADP 32.0988
127 5G3Y ADP 33.3333
Pocket No.: 4; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 62
This union binding pocket(no: 4) in the query (biounit: 1lnx.bio1) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 3FUR Z12 None
2 5BO9 CSF None
3 5BO9 SIA GAL NGS None
4 1Y13 BIO None
5 2CDN ADP None
6 2FNU PMP UD1 None
7 1S7N COA None
8 1H5Q NAP None
9 4TQ3 GPP 2.46914
10 5JGL SAM 2.46914
11 1P7L ANP 3.7037
12 1JF0 CZH 3.7037
13 3F6R FMN 3.7037
14 1X92 M7P 3.7037
15 5NTP 98E 4.93827
16 5TWB FAD 4.93827
17 1K7L 544 4.93827
18 3SP6 IL2 4.93827
19 1I58 ACP 4.93827
20 4DCM SAM 4.93827
21 5HSA FAS 4.93827
22 4P8K FAD 6.17284
23 4P8K 38C 6.17284
24 4YDQ ANP 6.17284
25 1K97 CIR 6.17284
26 1K97 ASP 6.17284
27 1NLI ADE 6.17284
28 4Q86 AMP 6.17284
29 2C9O ADP 7.40741
30 3OID NDP 7.40741
31 1EWF PC1 8.64198
32 4F7E 0SH 8.64198
33 2C49 ANP 8.64198
34 3ZQ6 ADP ALF 8.64198
35 3VMG 9CA 8.64198
36 4DJA FAD 9.87654
37 4DJA DLZ 9.87654
38 2Q7V FAD 9.87654
39 2WZG UPG 9.87654
40 5ZCO CHD 9.87654
41 5Z84 CHD 9.87654
42 3PC3 P1T 9.87654
43 5TPR NAD 11.1111
44 2WKQ FMN 11.1111
45 1H6C NDP 12.3457
46 1H6C SIN 12.3457
47 4Y30 49L 13.5802
48 2Z6C FMN 13.5802
49 5DKK FMN 16.0494
50 4N49 SAM 17.284
51 4XCZ T3Q 17.284
52 3B9Z CO2 17.284
53 2G5C NAD 19.7531
54 3CXH SMA 19.7531
55 3CX5 SMA 19.7531
56 2UUU FAD 22.2222
57 2UUU PL3 22.2222
58 3AAQ ARU 23.4568
59 5OM2 DXT 23.4568
60 2PK3 GDD 25.9259
61 2D5Z L35 35.8025
62 4ZOH FAD 38.2716
Pocket No.: 5; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 119
This union binding pocket(no: 5) in the query (biounit: 1lnx.bio1) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 4P5Z Q7M None
2 5WA0 MSS None
3 1KDK DHT None
4 2YKL NLD None
5 2CWH PYC None
6 2Y6O 1N1 None
7 5N2D 8J8 None
8 3FC2 IBI None
9 1OMZ UD2 None
10 4KWI 1TJ None
11 4KWI NAP None
12 5J60 FAD None
13 1IDA 0PO None
14 4RHY 3QG None
15 2OFV 242 None
16 1JPA ANP None
17 4C5N PXL None
18 5MGZ SAH None
19 4R6W SAH None
20 3APT FAD None
21 5J75 6GQ 1.51515
22 1SOX MTE 2.46914
23 4U63 FAD 2.46914
24 4NV7 COA 2.46914
25 4QMN DB8 3.7037
26 4IAE 1DX 3.7037
27 1X87 NAD 3.7037
28 5OCM NAP 3.7037
29 5TVA AMP 3.7037
30 4UUU SAM 3.7037
31 5TS5 FAD 4.93827
32 5VYQ FON 4.93827
33 4ELG 52I 6.17284
34 4TWP AXI 6.17284
35 4ELG 52J 6.17284
36 5UR1 YY9 6.17284
37 1XKD NAP 6.17284
38 1XRO LEU 6.17284
39 6F9Q NAD 6.17284
40 5Z2L NDP 6.17284
41 1P0F NAP 6.17284
42 3VRY B43 7.40741
43 4USF 6UI 7.40741
44 4KBA 1QM 7.40741
45 2HK5 1BM 7.40741
46 2QV6 GTP 7.40741
47 5W4W 9WG 7.40741
48 1TOX NAD 7.40741
49 1JG3 ADN 7.40741
50 5OJI NAP 7.40741
51 5OJI ISN 7.40741
52 4I3V NAD 7.40741
53 2YC5 6BC 7.40741
54 4IEN GDP 7.40741
55 4U0I 0LI 8.64198
56 6APV 3L4 8.64198
57 5L2R MLA 8.64198
58 1X9I G6Q 8.64198
59 1HXD BTN 8.64198
60 4YZN 4K5 8.64198
61 3UKR CKH 8.64198
62 4B2Z P5S 8.64198
63 6FW2 MTE 8.64198
64 2AG5 NAD 8.64198
65 2WEI VGG 8.64198
66 2QRD ATP 8.64198
67 2XCG XCG 8.64198
68 2Y4O DLL 8.64198
69 4GYW UDP 9.87654
70 3DLG GWE 9.87654
71 3T1A 5MA 9.87654
72 5BNW 12V 9.87654
73 2BII MTV 11.1111
74 4K26 SFF 11.1111
75 3ZLQ 6T9 11.1111
76 3TAY MN0 11.1111
77 4K26 NDP 11.1111
78 5DEY 59T 11.1111
79 5GWT SIN 11.1111
80 3AHC TPP 11.1111
81 3VBK COA 11.1111
82 4UXL 5P8 11.1111
83 6CMJ F6J 11.1111
84 5UY8 8UM 11.1111
85 5UY8 AMZ 11.1111
86 2E5A LAQ 11.1111
87 2QK4 ATP 12.3457
88 2VL1 GLY GLY 12.3457
89 3UYW TAU 12.3457
90 2X2M X2M 12.3457
91 4CQE CQE 13.5802
92 4XV1 904 13.5802
93 1J3I NDP 13.5802
94 3GC8 B45 13.5802
95 1J3I WRA 13.5802
96 3L9W FMN 13.5802
97 3G5D 1N1 16.0494
98 3CH6 NAP 16.0494
99 3CH6 311 16.0494
100 3OJF NDP 16.0494
101 2H8H H8H 16.0494
102 1Y57 MPZ 16.0494
103 5LXT GTP 17.284
104 4CRL C1I 17.284
105 6GWR FEW 18.5185
106 5JKG 6LF 18.5185
107 3D3W NAP 18.5185
108 3SRV S19 18.5185
109 5FUI APY 19.7531
110 5VNF VAL THR SER VAL VAL 19.7531
111 2OBD 2OB 19.7531
112 4EWH T77 24.6914
113 1LSH PLD 24.6914
114 4XTX 590 25.9259
115 1G16 GDP 28.3951
116 2PFC PLM 37.037
117 4AG8 AXI 38.2716
118 3VHE 42Q 38.2716
119 4ASE AV9 38.2716
Pocket No.: 6; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 16
This union binding pocket(no: 6) in the query (biounit: 1lnx.bio1) has 11 residues
No: Leader PDB Ligand Sequence Similarity
1 4MNS 2AX None
2 3QXV MTX None
3 1SGJ OAA None
4 4BAE RWX None
5 3SJ7 NDP None
6 1A27 NAP None
7 3L8H FX1 3.7037
8 5NQR 958 4.93827
9 5BRE 4UZ 7.40741
10 5GLN XYP XYP XYP 8.64198
11 5GLN XYS 8.64198
12 2BCG GDP 9.87654
13 4V24 GYR 12.3457
14 1S7G NAD 13.5802
15 1GDE GLU PLP 16.0494
16 5U98 1KX 19.7531
Pocket No.: 7; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 105
This union binding pocket(no: 7) in the query (biounit: 1lnx.bio1) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 1HSK FAD None
2 2GQT FAD None
3 1V0C ACO None
4 1V0C KNC None
5 5IXK 6EW None
6 5G41 AP5 None
7 3L9R L9Q None
8 2QHD DAO None
9 1NFQ NAI None
10 2WSB NAD None
11 4I67 G G G RPC None
12 2V2V V12 None
13 4G86 BNT None
14 6B5Q PPI CZS 2KY MLY 1XY None
15 4P6X HCY None
16 1H74 ILE None
17 3MG9 GHP 3MY 3FG GHP GHP OMY 3FG None
18 4MIX UD1 None
19 6C99 EQY None
20 1M2Z BOG None
21 4RGQ NDP None
22 4XB4 45D None
23 1I00 UMP 2.46914
24 1I00 D16 2.46914
25 6BR8 6OU 3.7037
26 5H5F SAM 3.7037
27 5W7D PX8 3.7037
28 1ZIN AP5 3.7037
29 4RW3 SHV 3.7037
30 1C3Q TZE 3.7037
31 1PZX PLM 3.7037
32 4XSU UDP 4.93827
33 4XSU GLC 4.93827
34 3FEI CTM 4.93827
35 2P54 735 4.93827
36 4YDQ HFG 6.17284
37 1JQ5 NAD 6.17284
38 2C9E DGD 6.17284
39 3VET ADP 7.40741
40 3VET CP 7.40741
41 3VHZ L2P GLC MAN SGA 7.40741
42 1X6V ADP 7.40741
43 1EM6 NBG 7.40741
44 5FFF 5XC 7.40741
45 5FFF NAP 7.40741
46 2I0K FAD 7.40741
47 4X7R 3YW 7.40741
48 4X7R UDP 7.40741
49 3QCP FAD 7.40741
50 4G2R H1L 8.64198
51 4D04 NAP 8.64198
52 4D04 FAD 8.64198
53 1DUV PSQ 8.64198
54 2EWM NAD 8.64198
55 1ATL 0QI 8.64198
56 2H21 SAM 8.64198
57 5W97 CHD 9.87654
58 2AE2 PTO 9.87654
59 2AE2 NAP 9.87654
60 4IA6 EIC 9.87654
61 4ZRN NAD 9.87654
62 3LDW IPE 9.87654
63 6BR9 6OU 9.87654
64 3WVS RRM 9.87654
65 5AE2 FYC 11.1111
66 3W2W ATP 11.1111
67 5GWT NAD 11.1111
68 5U3B 7TD 11.1111
69 3TDC 0EU 11.1111
70 4YSW NAI 12.3457
71 4YSW FAD 12.3457
72 5UQW GDP 12.3457
73 4N70 2HX 13.5802
74 1VGV UD1 13.5802
75 2HHP FLC 14.8148
76 6ER9 FAD 14.8148
77 2P1C GG3 16.0494
78 1FFU FAD 16.0494
79 5LXT GDP 17.284
80 6BMS POV 17.284
81 4OGQ 7PH 17.284
82 6EJI UD2 17.284
83 3HRD FAD 19.7531
84 5ZBL AMP 22.2222
85 5Y6Q FAD 23.4568
86 3GWL FAD 23.4568
87 3UR0 SVR 23.4568
88 4OAR 2S0 25.9259
89 2A92 NAI 25.9259
90 3UCL CYH 27.1605
91 3UCL FAD 27.1605
92 3UCL NAP 27.1605
93 4O6M C5P 28.3951
94 5EE5 GTP 28.3951
95 5AZC PGT 32.0988
96 5GT9 NAP 32.0988
97 4DV8 0LX 32.0988
98 3WHB DCC 34.5679
99 2OFW ADX 34.5679
100 2PEZ DAT 34.5679
101 5DHU 5A8 37.037
102 1UUO ORO 38.2716
103 1UUO FMN 38.2716
104 1UUO BRF 38.2716
105 2Q4W FAD 40.7407
Pocket No.: 8; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 2
This union binding pocket(no: 8) in the query (biounit: 1lnx.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 5K53 STE None
2 5DRB 5FJ 7.40741
Pocket No.: 9; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 9) in the query (biounit: 1lnx.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 10; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 3
This union binding pocket(no: 10) in the query (biounit: 1lnx.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
1 2IO8 ADP 6.17284
2 4JEM C5P 9.87654
3 1F76 FMN 22.2222
Pocket No.: 11; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1lnx.bio2) has 10 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 1lnx.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 13; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 13) in the query (biounit: 1lnx.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 14; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 14) in the query (biounit: 1lnx.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 15; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 15) in the query (biounit: 1lnx.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 16; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 10
This union binding pocket(no: 16) in the query (biounit: 1lnx.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
1 5O3Q CMP None
2 1TU3 GNP None
3 5NKB 8ZT None
4 2XTS MTE None
5 1NP7 FAD None
6 2P41 SAH 7.40741
7 1I1E DM2 8.64198
8 4Z87 GDP 9.87654
9 5X9D 80F 14.8148
10 4LRJ ANP 37.037
Pocket No.: 17; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 17) in the query (biounit: 1lnx.bio2) has 13 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 18; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 3
This union binding pocket(no: 18) in the query (biounit: 1lnx.bio2) has 12 residues
No: Leader PDB Ligand Sequence Similarity
1 4N14 WR7 None
2 4UBT 3G6 4.93827
3 2WOX NDP 17.284
Pocket No.: 19; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 19) in the query (biounit: 1lnx.bio2) has 12 residues
No: Leader PDB Ligand Sequence Similarity
Pocket No.: 20; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: 9
This union binding pocket(no: 20) in the query (biounit: 1lnx.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
1 4RGQ 13P None
2 4AUT FAD 7.40741
3 5BQI GSH 9.87654
4 5BQI 4UL 9.87654
5 2J73 GLC GLC GLC 11.1111
6 3T3C 017 11.1111
7 1MO9 FAD 33.3333
8 1MO9 KPC 33.3333
9 2H7C COA 37.037
Pocket No.: 21; Query (leader) PDB : 1LNX; Ligand: URI; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 21) in the query (biounit: 1lnx.bio2) has 14 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback