Receptor
PDB id Resolution Class Description Source Keywords
1J21 2.2 Å EC: 6.3.4.5 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS HB8 ARGININOSUCCINATE SYNTHETASE IN COMPLEX WITH ATP AND C ITRULLINE THERMUS THERMOPHILUS LIGASE ATP-BINDING RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI STRUCTURAL GENOMICS
Ref.: STRUCTURES OF ARGININOSUCCINATE SYNTHETASE IN ENZYME-ATP-SUBSTRATES AND ENZYME-AMP-PRODUCT FORMS J.BIOL.CHEM. V. 278 22964 2003
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
ATP A:510;
B:1510;
C:2510;
D:3510;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
507.181 C10 H16 N5 O13 P3 c1nc(...
CIR A:520;
B:1520;
C:2520;
D:3520;
Valid;
Valid;
Valid;
Valid;
none;
none;
none;
none;
submit data
175.186 C6 H13 N3 O3 C(C[C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1KOR 1.95 Å EC: 6.3.4.5 CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS HB8 ARGININOSUCCINATE SYNTHETASE IN COMPLEX WITH INHIBITORS THERMUS THERMOPHILUS LIGASE RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE RSGI STRUCTURAL GENOMICS
Ref.: CRYSTAL STRUCTURE OF ARGININOSUCCINATE SYNTHETASE FROM THERMUS THERMOPHILUS HB8. STRUCTURAL BASIS FOR THE CATALYTIC ACTION. J.BIOL.CHEM. V. 277 15890 2002
Members (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1J1Z - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
2 1KH2 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 1KOR - ARG C6 H15 N4 O2 C(C[C@@H](....
4 1KH3 - ARG C6 H15 N4 O2 C(C[C@@H](....
5 1J20 - AS1 C10 H18 N4 O6 [H]/N=C(/N....
6 1J21 - CIR C6 H13 N3 O3 C(C[C@@H](....
70% Homology Family (6)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 3 families.
1 1J1Z - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
2 1KH2 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 1KOR - ARG C6 H15 N4 O2 C(C[C@@H](....
4 1KH3 - ARG C6 H15 N4 O2 C(C[C@@H](....
5 1J20 - AS1 C10 H18 N4 O6 [H]/N=C(/N....
6 1J21 - CIR C6 H13 N3 O3 C(C[C@@H](....
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 2 families.
1 2NZ2 - CIR C6 H13 N3 O3 C(C[C@@H](....
2 1J1Z - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
3 1KH2 - ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
4 1KOR - ARG C6 H15 N4 O2 C(C[C@@H](....
5 1KH3 - ARG C6 H15 N4 O2 C(C[C@@H](....
6 1J20 - AS1 C10 H18 N4 O6 [H]/N=C(/N....
7 1J21 - CIR C6 H13 N3 O3 C(C[C@@H](....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: ATP; Similar ligands found: 404
No: Ligand ECFP6 Tc MDL keys Tc
1 ATP 1 1
2 AQP 0.985507 1
3 5FA 0.985507 1
4 B4P 0.927536 0.971831
5 AP5 0.927536 0.971831
6 BA3 0.913043 0.971831
7 ADP 0.9 1
8 A2D 0.884058 0.971831
9 SAP 0.84 0.945946
10 AGS 0.84 0.945946
11 AN2 0.810811 0.985915
12 25L 0.809524 0.985915
13 APR 0.802632 0.971831
14 AR6 0.802632 0.971831
15 M33 0.8 0.958333
16 TAT 0.794872 0.958904
17 ACQ 0.794872 0.972222
18 AD9 0.792208 0.972222
19 ACP 0.789474 0.972222
20 A 0.788732 0.971429
21 AMP 0.788732 0.971429
22 ANP 0.772152 0.972222
23 ADX 0.753247 0.873418
24 CA0 0.753247 0.945205
25 A22 0.746988 0.985915
26 50T 0.74359 0.958333
27 APC 0.734177 0.958904
28 PRX 0.734177 0.893333
29 ABM 0.733333 0.917808
30 ATF 0.731707 0.958904
31 ITT 0.730769 0.943662
32 7D4 0.730769 0.905405
33 ADQ 0.729412 0.945205
34 AMP MG 0.72 0.891892
35 AP2 0.714286 0.958904
36 A12 0.714286 0.958904
37 A1R 0.709302 0.907895
38 SRA 0.706667 0.918919
39 5AL 0.698795 0.931507
40 OAD 0.693182 0.945205
41 ADP MG 0.6875 0.905405
42 AU1 0.6875 0.972222
43 SRP 0.682353 0.906667
44 G5P 0.680851 0.921053
45 BEF ADP 0.679012 0.881579
46 ADP BEF 0.679012 0.881579
47 25A 0.678161 0.971831
48 3OD 0.677778 0.945205
49 4AD 0.670455 0.92
50 G3A 0.670213 0.921053
51 00A 0.662921 0.883117
52 ADV 0.662651 0.932432
53 ADP PO3 0.662651 0.943662
54 RBY 0.662651 0.932432
55 BIS 0.659341 0.933333
56 5SV 0.659091 0.848101
57 8QN 0.659091 0.931507
58 OOB 0.659091 0.931507
59 GTA 0.65625 0.886076
60 ATP MG 0.654762 0.905405
61 UP5 0.653061 0.92
62 AMO 0.651685 0.932432
63 PAJ 0.651685 0.884615
64 2A5 0.650602 0.918919
65 MAP 0.647727 0.945946
66 3AT 0.647059 0.971831
67 AHX 0.644444 0.896104
68 DLL 0.644444 0.931507
69 PAP 0.642857 0.985714
70 ATR 0.642857 0.971429
71 PTJ 0.641304 0.896104
72 7D3 0.6375 0.905405
73 3UK 0.637363 0.918919
74 SON 0.634146 0.932432
75 A4P 0.633663 0.843373
76 ALF ADP 0.632184 0.87013
77 ADP ALF 0.632184 0.87013
78 LAD 0.630435 0.860759
79 WAQ 0.630435 0.883117
80 PR8 0.630435 0.85
81 AFH 0.628866 0.884615
82 DTP 0.627907 0.905405
83 GAP 0.627907 0.893333
84 ANP MG 0.625 0.894737
85 VO4 ADP 0.625 0.931507
86 ADP VO4 0.625 0.931507
87 1ZZ 0.623656 0.839506
88 TXA 0.623656 0.932432
89 FYA 0.623656 0.905405
90 ME8 0.623656 0.839506
91 NB8 0.623656 0.896104
92 T5A 0.621359 0.841463
93 RAB 0.619718 0.84507
94 ADN 0.619718 0.84507
95 XYA 0.619718 0.84507
96 9SN 0.610526 0.871795
97 48N 0.61 0.896104
98 AP0 0.607843 0.896104
99 FA5 0.604167 0.906667
100 YAP 0.604167 0.894737
101 TXD 0.60396 0.907895
102 6V0 0.60396 0.896104
103 NXX 0.60396 0.932432
104 NAI 0.60396 0.907895
105 DND 0.60396 0.932432
106 NAX 0.60396 0.873418
107 ADP BMA 0.602151 0.918919
108 A2R 0.6 0.985915
109 OMR 0.598039 0.851852
110 TXE 0.598039 0.907895
111 XAH 0.597938 0.839506
112 DAL AMP 0.593407 0.905405
113 7DT 0.593023 0.985714
114 AOC 0.592593 0.821918
115 4UV 0.591837 0.894737
116 DDS 0.590909 0.878378
117 139 0.590476 0.873418
118 CNA 0.584906 0.932432
119 6AD 0.58427 0.909091
120 5AS 0.583333 0.77907
121 5N5 0.581081 0.819444
122 4UU 0.58 0.894737
123 4TC 0.576923 0.896104
124 ADJ 0.575472 0.851852
125 5CD 0.573333 0.805556
126 A4D 0.573333 0.819444
127 RGT 0.571429 0.958904
128 A3P 0.571429 0.971429
129 7D5 0.56962 0.878378
130 LAQ 0.568627 0.839506
131 YLP 0.563107 0.819277
132 A A 0.5625 0.944444
133 UPA 0.561905 0.907895
134 AV2 0.56044 0.917808
135 COD 0.559633 0.811765
136 4UW 0.557692 0.860759
137 JB6 0.556701 0.883117
138 3AM 0.555556 0.929577
139 ATP A A A 0.555556 0.930556
140 A2P 0.552941 0.957143
141 TYM 0.552381 0.906667
142 NA7 0.552083 0.958904
143 EP4 0.551282 0.753247
144 MYR AMP 0.55102 0.817073
145 PPS 0.549451 0.873418
146 YLB 0.54717 0.819277
147 YLC 0.54717 0.839506
148 NAD 0.545455 0.931507
149 DAT 0.545455 0.905405
150 G5A 0.544444 0.77907
151 M2T 0.544304 0.734177
152 DTA 0.544304 0.786667
153 3DH 0.54321 0.773333
154 128 0.542857 0.776471
155 AHZ 0.538462 0.817073
156 SSA 0.537634 0.8
157 GTP 0.537634 0.92
158 MTA 0.5375 0.773333
159 IOT 0.537037 0.831325
160 A3D 0.535714 0.918919
161 TYR AMP 0.534653 0.881579
162 AR6 AR6 0.533981 0.917808
163 7MD 0.533981 0.8625
164 YLA 0.53211 0.819277
165 AMP DBH 0.529412 0.893333
166 IMO 0.529412 0.929577
167 TAD 0.528846 0.884615
168 AYB 0.527273 0.809524
169 A5A 0.526882 0.807229
170 TSB 0.526316 0.819277
171 EAD 0.525424 0.873418
172 2AM 0.52439 0.943662
173 6RE 0.52381 0.759494
174 7DD 0.522727 0.985714
175 V3L 0.521739 0.971831
176 AVV 0.520833 0.896104
177 BTX 0.517857 0.841463
178 NAE 0.517241 0.894737
179 54H 0.515789 0.788235
180 VMS 0.515789 0.788235
181 52H 0.515789 0.77907
182 NSS 0.515464 0.8
183 BT5 0.513274 0.831325
184 NAQ 0.512821 0.871795
185 ZAS 0.511905 0.766234
186 A3N 0.511628 0.786667
187 J7C 0.511628 0.769231
188 5X8 0.511111 0.763158
189 53H 0.510417 0.77907
190 5CA 0.510417 0.8
191 ARU 0.510204 0.860759
192 ARG AMP 0.509434 0.829268
193 AF3 ADP 3PG 0.509259 0.8375
194 LA8 ALF 3PG 0.509259 0.8375
195 ALF ADP 3PG 0.509259 0.8375
196 ZID 0.508475 0.918919
197 P1H 0.508197 0.851852
198 OVE 0.505882 0.905405
199 S4M 0.505747 0.666667
200 LPA AMP 0.504673 0.817073
201 7MC 0.504587 0.841463
202 DZD 0.5 0.884615
203 LSS 0.5 0.761364
204 DSZ 0.5 0.8
205 P5A 0.5 0.744444
206 DSH 0.5 0.725
207 FB0 0.5 0.804598
208 MAO 0.5 0.759036
209 NDE 0.495935 0.932432
210 N0B 0.495798 0.819277
211 M24 0.495726 0.85
212 YLY 0.495726 0.809524
213 NJP 0.495575 0.945946
214 NVA LMS 0.494949 0.761364
215 MGP 0.494737 0.884615
216 6C6 0.494624 0.881579
217 NAJ PZO 0.491379 0.848101
218 0WD 0.491228 0.921053
219 LEU LMS 0.49 0.761364
220 6G0 0.489583 0.884615
221 GJV 0.488636 0.75
222 6FA 0.488189 0.841463
223 5AD 0.486842 0.746479
224 GSU 0.485149 0.77907
225 KAA 0.485149 0.752809
226 71V 0.483146 0.907895
227 NEC 0.482759 0.746667
228 A3G 0.482759 0.8
229 NAD IBO 0.482456 0.87013
230 ODP 0.482456 0.909091
231 FAS 0.48062 0.851852
232 FAD 0.48062 0.851852
233 7D7 0.480519 0.743243
234 FDA 0.480315 0.833333
235 N6P 0.48 0.915493
236 2SA 0.479167 0.932432
237 GP3 0.478723 0.921053
238 4TA 0.478261 0.807229
239 G A A A 0.478261 0.871795
240 SFG 0.478261 0.75
241 NPW 0.477876 0.886076
242 NDP 0.477876 0.921053
243 NDC 0.47619 0.871795
244 YSA 0.47619 0.77907
245 MGO 0.474227 0.860759
246 6IA 0.473684 0.8375
247 TXP 0.473684 0.921053
248 GDP 0.473684 0.92
249 NZQ 0.473684 0.909091
250 A7D 0.472527 0.776316
251 SFD 0.469231 0.734043
252 ZDA 0.468085 0.864865
253 SA8 0.468085 0.707317
254 A5D 0.468085 0.786667
255 12D 0.46789 0.785714
256 PGS 0.467391 0.883117
257 MHZ 0.467391 0.697674
258 62F 0.466165 0.8625
259 DA 0.465909 0.878378
260 D5M 0.465909 0.878378
261 GGZ 0.464646 0.825
262 SAH 0.463158 0.74359
263 SAI 0.463158 0.734177
264 NAJ PYZ 0.46281 0.85
265 FAY 0.462687 0.8625
266 Y3J 0.4625 0.726027
267 PO4 PO4 A A A A PO4 0.460784 0.902778
268 AAM 0.460674 0.971429
269 RFL 0.459259 0.821429
270 SMM 0.459184 0.686047
271 AMZ 0.458824 0.916667
272 C2R 0.458824 0.90411
273 SAM 0.458333 0.690476
274 A3S 0.456522 0.810811
275 FNK 0.455224 0.804598
276 7C5 0.453704 0.818182
277 AAT 0.453608 0.707317
278 EEM 0.453608 0.690476
279 XNP 0.452991 0.873418
280 AIR 0.451219 0.901408
281 62X 0.45098 0.666667
282 GSP 0.45 0.873418
283 ETB 0.45 0.833333
284 DCA 0.45 0.823529
285 U A G G 0.449153 0.883117
286 NIA 0.448276 0.822785
287 AMP NAD 0.447154 0.881579
288 A3T 0.446809 0.821918
289 K15 0.446602 0.682353
290 A A A 0.446602 0.905405
291 PUA 0.446281 0.884615
292 6K6 0.445545 0.930556
293 GEK 0.445545 0.7375
294 4YB 0.445455 0.761364
295 S7M 0.444444 0.690476
296 DG1 0.443548 0.921053
297 1DG 0.443548 0.921053
298 Z5A 0.443548 0.77907
299 COA 0.442623 0.823529
300 0T1 0.442623 0.823529
301 WSA 0.442478 0.788235
302 8BR 0.43956 0.906667
303 101 0.438202 0.878378
304 IDP 0.4375 0.918919
305 NAP 0.435484 0.945205
306 APU 0.434783 0.894737
307 A U 0.434783 0.87013
308 7RP 0.433333 0.928571
309 A6D 0.432692 0.722892
310 CAO 0.432 0.795455
311 AMX 0.432 0.833333
312 COS 0.432 0.804598
313 TAP 0.432 0.907895
314 J7V 0.432 0.833333
315 30N 0.432 0.752688
316 V1N 0.431193 0.917808
317 649 0.429825 0.744444
318 P5F 0.429577 0.823529
319 NA0 0.428571 0.932432
320 CMX 0.428571 0.823529
321 7RA 0.428571 0.957747
322 SCO 0.428571 0.823529
323 0UM 0.427184 0.698795
324 GAV 0.427184 0.884615
325 ACK 0.426966 0.861111
326 1RB 0.426966 0.885714
327 QQY 0.426966 0.815789
328 GCP 0.425743 0.896104
329 G1R 0.425743 0.907895
330 FAM 0.425197 0.804598
331 FCX 0.425197 0.795455
332 ACO 0.425197 0.795455
333 GNH 0.424242 0.907895
334 F2N 0.423611 0.813953
335 GDC 0.422018 0.884615
336 GDD 0.422018 0.884615
337 GKE 0.422018 0.884615
338 HAX 0.421875 0.804598
339 3AD 0.421687 0.805556
340 GNP 0.421569 0.896104
341 FA9 0.42069 0.864198
342 KB1 0.420561 0.698795
343 TM1 0.420561 0.77381
344 H6Y 0.42 0.945205
345 2MC 0.419847 0.769231
346 3KK 0.418605 0.804598
347 FYN 0.418605 0.823529
348 S8M 0.417476 0.759494
349 2VA 0.416667 0.8
350 NHD 0.416667 0.905405
351 26A 0.416667 0.763158
352 QQX 0.41573 0.805195
353 SOP 0.415385 0.804598
354 OXK 0.415385 0.804598
355 COK 0.415385 0.804598
356 MCD 0.415385 0.804598
357 CA6 0.415385 0.729167
358 YE1 0.413534 0.813953
359 FAI 0.413043 0.916667
360 AS 0.413043 0.833333
361 RMB 0.413043 0.873239
362 1VU 0.412214 0.795455
363 CO6 0.412214 0.804598
364 CMC 0.412214 0.804598
365 NMX 0.412214 0.76087
366 SXZ 0.411215 0.710843
367 ANZ 0.410714 0.8
368 SCA 0.410448 0.804598
369 PLP AAD 0.409836 0.741573
370 SCD 0.409091 0.823529
371 CAJ 0.409091 0.804598
372 NAD BBN 0.408759 0.841463
373 NVA 2AD 0.408163 0.74359
374 D3Y 0.407767 0.789474
375 CC5 0.407407 0.816901
376 U G A 0.407407 0.839506
377 KH3 0.40708 0.674419
378 SLU 0.406504 0.770115
379 G 0.40625 0.906667
380 5GP 0.40625 0.906667
381 BCO 0.406015 0.804598
382 IVC 0.406015 0.813953
383 A1S 0.406015 0.804598
384 MLC 0.406015 0.804598
385 3HC 0.406015 0.813953
386 1HE 0.406015 0.786517
387 GTG 0.405405 0.886076
388 NMN AMP PO4 0.404959 0.87013
389 3D1 0.404762 0.773333
390 3L1 0.404762 0.773333
391 CMP 0.404255 0.901408
392 2BA 0.404255 0.915493
393 SO8 0.40404 0.789474
394 VRT 0.40404 0.769231
395 MCA 0.402985 0.795455
396 CAA 0.402985 0.813953
397 COO 0.402985 0.804598
398 NAD CJ3 0.402878 0.811765
399 G2R 0.401869 0.884615
400 3NZ 0.401869 0.782051
401 ZZB 0.4 0.77381
402 MC4 0.4 0.76087
403 2FA 0.4 0.813333
404 2CP 0.4 0.795455
Ligand no: 2; Ligand: CIR; Similar ligands found: 49
No: Ligand ECFP6 Tc MDL keys Tc
1 CIR 1 1
2 DAR 0.735294 0.763158
3 ARG 0.735294 0.763158
4 ILO 0.631579 0.675
5 ONH 0.6 0.619048
6 HAR 0.6 0.681818
7 4JK 0.6 0.725
8 VUR 0.6 0.7
9 WT2 0.585366 0.783784
10 PAO 0.571429 0.615385
11 DA2 0.571429 0.617021
12 3AR 0.571429 0.690476
13 2YH 0.55814 0.810811
14 3KJ 0.55814 0.6
15 VIO 0.55814 0.627907
16 1KJ 0.545455 0.652174
17 JM2 0.545455 0.636364
18 AAR 0.540541 0.675
19 2YJ 0.533333 0.769231
20 RPI 0.533333 0.627451
21 API 0.53125 0.685714
22 LN6 0.521739 0.627907
23 ALY 0.512195 0.74359
24 HRG 0.512195 0.763158
25 JM7 0.510638 0.636364
26 JM8 0.510204 0.622222
27 2KJ 0.5 0.638298
28 AS1 0.5 0.738095
29 D20 0.5 0.652174
30 OLN 0.488372 0.894737
31 ORN 0.485714 0.735294
32 JM4 0.48 0.608696
33 JM6 0.48 0.608696
34 MLZ 0.475 0.634146
35 JM5 0.470588 0.622222
36 UN1 0.459459 0.638889
37 11C 0.459459 0.638889
38 DLY 0.459459 0.714286
39 DHH 0.447368 0.621622
40 LYS 0.447368 0.694444
41 0TF 0.4375 0.769231
42 NPI 0.435897 0.621622
43 2YG 0.428571 0.769231
44 LBY 0.428571 0.688889
45 6CL 0.425 0.666667
46 5CT 0.416667 0.658537
47 HSE 0.411765 0.605263
48 DAB 0.411765 0.666667
49 HCS 0.4 0.611111
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1KOR; Ligand: ARG; Similar sites found: 29
This union binding pocket(no: 1) in the query (biounit: 1kor.bio1) has 84 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4WOE ADP 0.02023 0.45704 2.25
2 2G30 ALA ALA PHE 0.004872 0.4247 2.32558
3 3WV6 GAL GLC 0.04201 0.41448 2.36486
4 2QHV OC9 0.04107 0.43323 2.38095
5 2Z5Y HRM 0.03132 0.44007 2.75
6 5H5F SAM 0.03217 0.41227 3.4188
7 2C5S AMP 0.00006 0.59571 3.5
8 1DL2 NAG NAG BMA 0.03968 0.42724 3.5
9 1RYD GLC 0.02506 0.45226 3.61757
10 1JJE BYS 0.02947 0.41921 4.05405
11 5APG EEM 0.03833 0.41094 4.32432
12 2VOH CIT 0.04142 0.45085 5.09554
13 4FMJ SIA GAL 0.0211 0.43795 5.19031
14 2YMZ LAT 0.04434 0.41279 5.38462
15 5EWK P34 0.02475 0.45088 5.5
16 4RRG A3T 0.02841 0.42275 6
17 1JGT CMA 0.001075 0.46137 6.25
18 1JGT APC 0.001391 0.45387 6.25
19 5DG2 GAL GLC 0.03995 0.41645 6.66667
20 5A7Y SAH 0.01366 0.46089 9.29487
21 3FIU AMP 0.004818 0.48209 10.4418
22 3FIU POP 0.02399 0.45474 10.4418
23 4RYV ZEA 0.01219 0.45947 10.9677
24 4WGF HX2 0.01065 0.47685 11.7073
25 2WSI FAD 0.005921 0.45092 12.0915
26 4C5N ACP 0.02864 0.41003 12.3188
27 5UDS ATP 0.000006442 0.64271 14.3357
28 3JUC PCA 0.03242 0.43525 17.6471
29 3G6K FAD 0.008741 0.41574 18.5
Pocket No.: 2; Query (leader) PDB : 1KOR; Ligand: ARG; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 1kor.bio1) has 39 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 3; Query (leader) PDB : 1KOR; Ligand: ARG; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 3) in the query (biounit: 1kor.bio1) has 83 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 4; Query (leader) PDB : 1KOR; Ligand: ANP; Similar sites found: 26
This union binding pocket(no: 4) in the query (biounit: 1kor.bio1) has 86 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 5GVR LMR 0.01274 0.44364 2.13675
2 4WOE ADP 0.02059 0.45704 2.25
3 2G30 ALA ALA PHE 0.004952 0.4247 2.32558
4 2QHV OC9 0.04179 0.43323 2.38095
5 2Z5Y HRM 0.03189 0.44007 2.75
6 5H5F SAM 0.03286 0.41227 3.4188
7 2C5S AMP 0.00006158 0.59571 3.5
8 1DL2 NAG NAG BMA 0.04026 0.42724 3.5
9 1RYD GLC 0.02549 0.45226 3.61757
10 1JJE BYS 0.03008 0.41921 4.05405
11 5APG EEM 0.03913 0.41094 4.32432
12 4FMJ SIA GAL 0.02141 0.43795 5.19031
13 5EWK P34 0.02518 0.45088 5.5
14 4RRG A3T 0.02899 0.42275 6
15 1JGT CMA 0.001108 0.46137 6.25
16 1JGT APC 0.001433 0.45387 6.25
17 5A7Y SAH 0.01392 0.46089 9.29487
18 3FIU POP 0.003484 0.50656 10.4418
19 3FIU AMP 0.004919 0.48209 10.4418
20 4RYV ZEA 0.01243 0.45947 10.9677
21 4WGF HX2 0.01084 0.47685 11.7073
22 2WSI FAD 0.006062 0.45092 12.0915
23 4C5N ACP 0.02928 0.41003 12.3188
24 5UDS ATP 0.000006634 0.64271 14.3357
25 3JUC PCA 0.03294 0.43525 17.6471
26 3G6K FAD 0.008982 0.41574 18.5
Pocket No.: 5; Query (leader) PDB : 1KOR; Ligand: ANP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 5) in the query (biounit: 1kor.bio1) has 86 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 6; Query (leader) PDB : 1KOR; Ligand: ANP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 6) in the query (biounit: 1kor.bio1) has 85 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 7; Query (leader) PDB : 1KOR; Ligand: ARG; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 7) in the query (biounit: 1kor.bio1) has 84 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 8; Query (leader) PDB : 1KOR; Ligand: SIN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 8) in the query (biounit: 1kor.bio1) has 40 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 9; Query (leader) PDB : 1KOR; Ligand: SIN; Similar sites found: 29
This union binding pocket(no: 9) in the query (biounit: 1kor.bio1) has 85 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4WOE ADP 0.02023 0.45704 2.25
2 2G30 ALA ALA PHE 0.004872 0.4247 2.32558
3 3WV6 GAL GLC 0.04201 0.41448 2.36486
4 2QHV OC9 0.04107 0.43323 2.38095
5 2Z5Y HRM 0.03132 0.44007 2.75
6 5H5F SAM 0.03217 0.41227 3.4188
7 2C5S AMP 0.00006 0.59571 3.5
8 1DL2 NAG NAG BMA 0.03968 0.42724 3.5
9 1RYD GLC 0.02506 0.45226 3.61757
10 1JJE BYS 0.02947 0.41921 4.05405
11 5APG EEM 0.03833 0.41094 4.32432
12 2VOH CIT 0.04142 0.45085 5.09554
13 4FMJ SIA GAL 0.0211 0.43795 5.19031
14 2YMZ LAT 0.04434 0.41279 5.38462
15 5EWK P34 0.02475 0.45088 5.5
16 4RRG A3T 0.02841 0.42275 6
17 1JGT CMA 0.001075 0.46137 6.25
18 1JGT APC 0.001391 0.45387 6.25
19 5DG2 GAL GLC 0.03995 0.41645 6.66667
20 5A7Y SAH 0.01366 0.46089 9.29487
21 3FIU AMP 0.004818 0.48209 10.4418
22 3FIU POP 0.02399 0.45474 10.4418
23 4RYV ZEA 0.01219 0.45947 10.9677
24 4WGF HX2 0.01065 0.47685 11.7073
25 2WSI FAD 0.005921 0.45092 12.0915
26 4C5N ACP 0.02864 0.41003 12.3188
27 5UDS ATP 0.000006442 0.64271 14.3357
28 3JUC PCA 0.03242 0.43525 17.6471
29 3G6K FAD 0.008741 0.41574 18.5
Pocket No.: 10; Query (leader) PDB : 1KOR; Ligand: ANP; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 10) in the query (biounit: 1kor.bio1) has 40 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 11; Query (leader) PDB : 1KOR; Ligand: SIN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 11) in the query (biounit: 1kor.bio1) has 85 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
Pocket No.: 12; Query (leader) PDB : 1KOR; Ligand: SIN; Similar sites found: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 12) in the query (biounit: 1kor.bio1) has 84 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
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