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- Structure Biounit | Ligand Information
- PDB : .ZIP | .CSV
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- Class : .ZIP | .CSV
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 2 families. | |||||
1 | 1VEN | - | GLC | C6 H12 O6 | C([C@@H]1[.... |
2 | 1J18 | - | GLC GLC GLC GLC | n/a | n/a |
3 | 1ITC | - | GLC GLC | n/a | n/a |
4 | 1VEP | - | GLC GLC | n/a | n/a |
5 | 1VEM | - | GLC GLC | n/a | n/a |
6 | 1B9Z | - | GLC GLC | n/a | n/a |
7 | 1J0Z | - | GLC GLC | n/a | n/a |
8 | 1J10 | - | XYS GLC GLC | n/a | n/a |
9 | 1J0Y | - | BGC | C6 H12 O6 | C([C@@H]1[.... |
10 | 1VEO | - | GLC | C6 H12 O6 | C([C@@H]1[.... |
No: | PDB id | Binding Data | Representative ligand | Formula | Smiles |
---|---|---|---|---|---|
The Class containing this family consists of a total of 2 families. | |||||
1 | 1VEN | - | GLC | C6 H12 O6 | C([C@@H]1[.... |
2 | 1J18 | - | GLC GLC GLC GLC | n/a | n/a |
3 | 1ITC | - | GLC GLC | n/a | n/a |
4 | 1VEP | - | GLC GLC | n/a | n/a |
5 | 1VEM | - | GLC GLC | n/a | n/a |
6 | 1B9Z | - | GLC GLC | n/a | n/a |
7 | 1J0Z | - | GLC GLC | n/a | n/a |
8 | 1J10 | - | XYS GLC GLC | n/a | n/a |
9 | 1J0Y | - | BGC | C6 H12 O6 | C([C@@H]1[.... |
10 | 1VEO | - | GLC | C6 H12 O6 | C([C@@H]1[.... |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|---|---|---|
1 | GLC GLC GLC GLC | 1 | 1 |
2 | GLC GLC GLC GLC GLC GLC GLC | 0.510638 | 0.939394 |
3 | GLC GLC GLC GLC GLC GLC | 0.510638 | 0.939394 |
4 | GLC GLC GLC GLC GLC GLC GLC GLC | 0.510638 | 0.939394 |
5 | 4PW | 0.5 | 0.777778 |
No: | Ligand | ECFP6 Tc | MDL keys Tc |
---|
No: | Ligand | Similarity coefficient |
---|---|---|
1 | BGC GLC GLC GLC | 0.9840 |
2 | GLC GLC AC1 | 0.9642 |
3 | GLC G6D ADH GLC | 0.9064 |
4 | GLC GAL GLD ACI | 0.9008 |
5 | GLC G6D ACI GLC | 0.8960 |
6 | BGC GLC AC1 | 0.8951 |
7 | GLC GLC DAF | 0.8904 |
8 | GLO GLC GLC GLC | 0.8881 |
9 | GLC GLC GLC BGC | 0.8817 |
10 | SOR GLC GLC GLC | 0.8761 |
No: | Ligand | Similarity coefficient |
---|---|---|
1 | BGC GLC | 1.0000 |
2 | GLC GLC | 0.9998 |
3 | GLC BGC | 0.9911 |
4 | BGC BGC | 0.9873 |
5 | NOJ GLC | 0.9825 |
6 | RR7 GLC | 0.9809 |
7 | BGC GLA | 0.9666 |
8 | GDQ GLC | 0.9615 |
9 | TW7 GLC | 0.9579 |
10 | XXX | 0.9578 |
11 | GLF B8D | 0.9555 |
12 | GLC GLA | 0.9547 |
13 | BDF GLC | 0.9546 |
14 | RZM | 0.9514 |
15 | IFM MAN | 0.9463 |
16 | BMA MAN | 0.9454 |
17 | GLC 7LQ | 0.9446 |
18 | MA1 GLC | 0.9424 |
19 | MYG | 0.9420 |
20 | SGC GLC | 0.9405 |
21 | FRU GLC | 0.9377 |
22 | BMA GLA | 0.9347 |
23 | DMJ MAN | 0.9334 |
24 | GLC IFM | 0.9295 |
25 | GLC DMJ | 0.9284 |
26 | DGO MAN | 0.9279 |
27 | DGO Z61 | 0.9207 |
28 | 7D1 MAN | 0.9205 |
29 | MAN IFM | 0.9188 |
30 | MAN MAN | 0.9156 |
31 | MAN MNM | 0.9137 |
32 | XMM | 0.9115 |
33 | XYP GCU | 0.9108 |
34 | BGC GAL | 0.9101 |
35 | ZEL MAN | 0.9090 |
36 | VDM | 0.9087 |
37 | MAN G63 | 0.9067 |
38 | MAN GLC | 0.9060 |
39 | BQZ | 0.9052 |
40 | GLC GAL | 0.9028 |
41 | MMA MAN | 0.8988 |
42 | MBG GLA | 0.8977 |
43 | MA3 MA2 | 0.8973 |
44 | BMA IFM | 0.8954 |
45 | IFM BMA | 0.8954 |
46 | GLC EDO GLC | 0.8923 |
47 | BMA BMA | 0.8892 |
48 | OTU | 0.8852 |
49 | ADN | 0.8852 |
50 | BGC BMA | 0.8844 |
51 | GAL GAL | 0.8832 |
52 | IXM | 0.8825 |
53 | EKH | 0.8825 |
54 | NOS | 0.8823 |
55 | FTU | 0.8819 |
56 | ABL | 0.8812 |
57 | BGC OXZ | 0.8811 |
58 | TBN | 0.8807 |
59 | FM2 | 0.8802 |
60 | 5ID | 0.8800 |
61 | BMA BGC | 0.8796 |
62 | UA2 | 0.8780 |
63 | IFM BGC | 0.8776 |
64 | BEM BEM | 0.8769 |
65 | IMH | 0.8764 |
66 | 9DI | 0.8754 |
67 | GLA BEZ | 0.8752 |
68 | AD3 | 0.8747 |
69 | GAL FUC | 0.8747 |
70 | 9MR | 0.8746 |
71 | FMC | 0.8731 |
72 | BGC Z9D | 0.8723 |
73 | A | 0.8713 |
74 | BNY | 0.8697 |
75 | MG7 | 0.8695 |
76 | FMB | 0.8694 |
77 | Z5L MAN | 0.8687 |
78 | FM1 | 0.8686 |
79 | ZT2 | 0.8677 |
80 | Z4Y MAN | 0.8675 |
81 | GMP | 0.8669 |
82 | TOP | 0.8668 |
83 | 26A | 0.8666 |
84 | GAL GLA | 0.8663 |
85 | DY9 | 0.8657 |
86 | MTP | 0.8652 |
87 | DBM | 0.8649 |
88 | XYA | 0.8648 |
89 | GAT | 0.8646 |
90 | 2AX | 0.8635 |
91 | 145 | 0.8630 |
92 | TAL | 0.8626 |
93 | CWU | 0.8624 |
94 | 0B3 | 0.8621 |
95 | XYP AHR | 0.8621 |
96 | D09 | 0.8620 |
97 | PNA | 0.8615 |
98 | SGC BGC | 0.8602 |
99 | MHD GAL | 0.8589 |
100 | EMU | 0.8585 |
101 | DIF | 0.8584 |
102 | VHD | 0.8576 |
103 | XTS | 0.8573 |
104 | 51P | 0.8567 |
105 | QRP | 0.8563 |
106 | XYP XIM | 0.8560 |
107 | VXM | 0.8560 |
108 | MTH | 0.8557 |
109 | UJ6 | 0.8547 |
110 | ZT4 | 0.8532 |
111 | XYS XYS | 0.8518 |
112 | YIO GAL | 0.8507 |
This union binding pocket(no: 1) in the query (biounit: 1vem.bio1) has 16 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
This union binding pocket(no: 2) in the query (biounit: 1vem.bio1) has 31 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
This union binding pocket(no: 3) in the query (biounit: 1vem.bio1) has 31 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |
This union binding pocket(no: 4) in the query (biounit: 1vem.bio1) has 5 residues | |||
---|---|---|---|
No: | Leader PDB | Ligand | Sequence Similarity |