Receptor
PDB id Resolution Class Description Source Keywords
1H4H 1.9 Å EC: 3.2.1.8 OLIGOSACCHARIDE-BINDING TO FAMILY 11 XYLANASES: BOTH COVALEN INTERMEDIATE AND MUTANT-PRODUCT COMPLEXES DISPLAY 2,5B CONFA T THE ACTIVE-CENTRE BACILLUS AGARADHAERENS GLYCOSIDE HYDROLASE XYLANASE OLIGOSACCHARIDE TRANSITION-SINTERMEDIATE MUTANT BOAT CONFORMATION
Ref.: CATALYSIS AND SPECIFICITY IN ENZYMATIC GLYCOSIDE HY A 2,5B CONFORMATION FOR THE GLYCOSYL-ENZYME INTERME REVEALED BY THE STRUCTURE OF THE BACILLUS AGARADHAE FAMILY 11 XYLANASE. CHEM.BIOL. V. 6 483 1999
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
XYS XYP XYP H:1;
E:1;
G:1;
F:1;
 Valid;
Valid;
Valid;
Valid;
 none;
none;
none;
none;
 submit data
n/a n/a
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1H4H 1.9 Å EC: 3.2.1.8 OLIGOSACCHARIDE-BINDING TO FAMILY 11 XYLANASES: BOTH COVALEN INTERMEDIATE AND MUTANT-PRODUCT COMPLEXES DISPLAY 2,5B CONFA T THE ACTIVE-CENTRE BACILLUS AGARADHAERENS GLYCOSIDE HYDROLASE XYLANASE OLIGOSACCHARIDE TRANSITION-SINTERMEDIATE MUTANT BOAT CONFORMATION
Ref.: CATALYSIS AND SPECIFICITY IN ENZYMATIC GLYCOSIDE HY A 2,5B CONFORMATION FOR THE GLYCOSYL-ENZYME INTERME REVEALED BY THE STRUCTURE OF THE BACILLUS AGARADHAE FAMILY 11 XYLANASE. CHEM.BIOL. V. 6 483 1999
Members (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 34 families.
1 1H4H - XYS XYP XYP n/a n/a
70% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 32 families.
1 1H4H - XYS XYP XYP n/a n/a
50% Homology Family (1)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 19 families.
1 1H4H - XYS XYP XYP n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: XYS XYP XYP; Similar ligands found: 0
No: Ligand ECFP6 Tc MDL keys Tc
Similar Ligands (3D)
Ligand no: 1; Ligand: XYS XYP XYP; Similar ligands found: 10
No: Ligand Similarity coefficient
1 XYS XYP XYP 1.0000
2 XYP XYP XYP 0.9664
3 XYS XYS XYS 0.9244
4 XYP XYP AHR 0.9149
5 XYS XYP AHR 0.9002
6 XYP TRS XYP 0.8976
7 C19 0.8712
8 GLC BGC BGC 0.8707
9 BGC BGC BGC 0.8703
10 38O 0.8667
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1H4H; Ligand: XYS XYP XYP; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 1h4h.bio4) has 19 residues
No: Leader PDB Ligand Sequence Similarity
APoc FAQ
Feedback