Receptor
PDB id Resolution Class Description Source Keywords
1D0L 1.97 Å EC: 3.2.1.- THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A ESCHERICHIA COLI ALPHA-HELICAL PROTEIN WITH A FIVE STRANDED ANTI-PARALLEL BETA-SHEET GLYCOSYL TRANSFERASE EF-HAND
Ref.: CRYSTALLOGRAPHIC STUDIES OF THE INTERACTIONS OF ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 WITH PEPTIDOGLYCAN. BIOCHEMISTRY V. 39 1924 2000
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
BLG A:401;
Valid;
none;
submit data
552.551 C16 H30 N3 O14 S2 CC(=O...
CA A:400;
Part of Protein;
none;
submit data
40.078 Ca [Ca+2...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
1D0L 1.97 Å EC: 3.2.1.- THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH BULGECIN A ESCHERICHIA COLI ALPHA-HELICAL PROTEIN WITH A FIVE STRANDED ANTI-PARALLEL BETA-SHEET GLYCOSYL TRANSFERASE EF-HAND
Ref.: CRYSTALLOGRAPHIC STUDIES OF THE INTERACTIONS OF ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 WITH PEPTIDOGLYCAN. BIOCHEMISTRY V. 39 1924 2000
Members (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 15 families.
1 1D0K - NAG AMU ALA DGL n/a n/a
2 1D0M - NAG NDG n/a n/a
3 1D0L - BLG C16 H30 N3 O14 S2 CC(=O)N[C@....
4 1QUT - NAG C8 H15 N O6 CC(=O)N[C@....
70% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 15 families.
1 1D0K - NAG AMU ALA DGL n/a n/a
2 1D0M - NAG NDG n/a n/a
3 1D0L - BLG C16 H30 N3 O14 S2 CC(=O)N[C@....
4 1QUT - NAG C8 H15 N O6 CC(=O)N[C@....
50% Homology Family (4)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 10 families.
1 1D0K - NAG AMU ALA DGL n/a n/a
2 1D0M - NAG NDG n/a n/a
3 1D0L - BLG C16 H30 N3 O14 S2 CC(=O)N[C@....
4 1QUT - NAG C8 H15 N O6 CC(=O)N[C@....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: BLG; Similar ligands found: 3
No: Ligand ECFP6 Tc MDL keys Tc
1 BLG 1 1
2 BUL 0.618557 0.973684
3 ASG 0.425287 0.763158
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 1D0L; Ligand: BLG; Similar sites found: 15
This union binding pocket(no: 1) in the query (biounit: 1d0l.bio1) has 31 residues
No: Leader PDB Ligand P-value (APoc) PS_Score (APoc) Sequence Similarity
1 4CFP NAG AMU NAG AMV 0.00004343 0.45165 2.17391
2 2XQO CTR 0.0002136 0.52481 3.29218
3 1H8P PC 0.02642 0.41274 3.66972
4 3CQL NAG 0.02396 0.41466 4.11523
5 3MA0 XYP 0.03193 0.41157 4.15335
6 3W6C NAG NAG 0.00005787 0.46266 4.37158
7 5FCB AMP 0.01252 0.43096 6.21118
8 4HJY NAG NAG NAG 0.00001476 0.4635 6.79612
9 5MPQ BLG 0.0000009183 0.62194 7.14286
10 1LZR NAG NAG NAG NAG 0.002312 0.44554 7.69231
11 2VOH CIT 0.03431 0.41821 10.1911
12 2DQA NAG NAG NAG 0.02843 0.40406 16.9355
13 4HP0 NOJ NAG NAG NAG 0.0007486 0.41424 18.6047
14 5AO7 AH0 NAG 0.000000000002338 0.67799 38.8199
15 5AO7 NAG 0.000000000005734 0.65457 38.8199
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