Receptor
PDB id Resolution Class Description Source Keywords
11BA 2.06 Å EC: 3.1.27.5 BINDING OF A SUBSTRATE ANALOGUE TO A DOMAIN SWAPPING PROTEIN COMPLEX OF BOVINE SEMINAL RIBONUCLEASE WITH URIDYLYL-2',5'- BOS TAURUS HYDROLASE PHOSPHORIC DIESTER RNA 2-prime -5-prime -DINUCLEOTIDE
Ref.: BINDING OF A SUBSTRATE ANALOG TO A DOMAIN SWAPPING X-RAY STRUCTURE OF THE COMPLEX OF BOVINE SEMINAL RIBONUCLEASE WITH URIDYLYL(2',5')ADENOSINE. PROTEIN SCI. V. 7 1691 1998
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
SO4 A:127;
B:128;
B:129;
Invalid;
Invalid;
Invalid;
none;
none;
none;
submit data
96.063 O4 S [O-]S...
UPA A:125;
B:126;
Valid;
Valid;
none;
none;
submit data
573.407 C19 H24 N7 O12 P c1nc(...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3DJV 1.6 Å EC: 3.1.27.5 BOVINE SEMINAL RIBONUCLEASE- CYTIDINE 3' PHOSPHATE COMPLEX BOS TAURUS RIBONUCLEASE HYDROLASE ALLOSTERIC ENZYME ENDONUCLEASE NUSECRETED
Ref.: MAPPING THE RIBONUCLEOLYTIC ACTIVE SITE OF BOVINE S RIBONUCLEASE. THE BINDING OF PYRIMIDINYL PHOSPHONUC INHIBITORS EUR.J.MED.CHEM. V. 44 4496 2009
Members (10)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 5 families.
1 11BA - UPA C19 H24 N7 O12 P c1nc(c2c(n....
2 1TQ9 - CPA C19 H25 N8 O9 P c1nc(c2c(n....
3 3DJO Ki = 40.8 uM U2P C9 H13 N2 O9 P C1=CN(C(=O....
4 1N3Z - U3P C9 H13 N2 O9 P C1=CN(C(=O....
5 3DJV Ki = 27.9 uM C3P C9 H14 N3 O8 P C1=CN(C(=O....
6 1R5C - CPA C19 H25 N8 O9 P c1nc(c2c(n....
7 3DJQ Ki = 1046.4 uM UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
8 3DJP Ki = 63.2 uM UA3 C9 H13 N2 O9 P C1=CN(C(=O....
9 3DJX Ki = 1557 uM C5P C9 H14 N3 O8 P C1=CN(C(=O....
10 11BG - U2G C19 H24 N7 O13 P c1nc2c(n1[....
70% Homology Family (75)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 1Z6D Ki = 4.6 mM IMP C10 H13 N4 O8 P c1nc2c(n1[....
2 1O0H Ki = 1.2 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
3 1JVU - C2P C9 H14 N3 O8 P C1=CN(C(=O....
4 3D7B Ki = 203 uM U4S C13 H19 N3 O5 C1CCN(C1)C....
5 3FL1 - CGP C19 H25 N8 O10 P c1nc2c(n1[....
6 3D6Q Ki = 172 uM U3S C14 H21 N3 O5 C1CCN(CC1)....
7 3JW1 - U5P C9 H13 N2 O9 P C1=CN(C(=O....
8 3EV6 - RSF C6 H10 O3 C1CO[C@H]2....
9 2W5I Ki = 4.7 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
10 3D8Y Ki = 396 uM T3S C15 H23 N3 O4 CC1=CN(C(=....
11 3D6O Ki = 77 uM U1S C17 H25 N3 O7 CCOC(=O)C1....
12 3LXO Kd = 15 uM T3P C10 H15 N2 O8 P CC1=CN(C(=....
13 1O0O Ki = 8 uM A2P C10 H15 N5 O10 P2 c1nc(c2c(n....
14 1RPF - C3P C9 H14 N3 O8 P C1=CN(C(=O....
15 3D6P Ki = 179 uM U2S C13 H19 N3 O6 C1COCCN1C[....
16 4G8V Ki = 1.6 uM 0EY C12 H15 N5 O6 c1c(nnn1[C....
17 1RNC - 5GP C10 H14 N5 O8 P c1nc2c(n1[....
18 4WYZ Kd = 50 uM U3P C9 H13 N2 O9 P C1=CN(C(=O....
19 1ROB - C2P C9 H14 N3 O8 P C1=CN(C(=O....
20 1W4Q Ki = 5.5 uM UMF C9 H12 F N2 O8 P C1=CN(C(=O....
21 1O0F Ki = 5 uM A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
22 3EV4 - ETF C2 H3 F3 O C(C(F)(F)F....
23 1RCA - CGP C19 H25 N8 O10 P c1nc2c(n1[....
24 1RND - DGP C10 H14 N5 O7 P c1nc2c(n1[....
25 4RSK Kd = 47.4 uM U3P C9 H13 N2 O9 P C1=CN(C(=O....
26 1RCN - DA DT DA DA n/a n/a
27 1RNM - C5P C9 H14 N3 O8 P C1=CN(C(=O....
28 2W5K Ki = 12 uM NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
29 2G8R Ki = 103 uM N3E C15 H21 N3 O7 C1CN(CCC1C....
30 1U1B Kd = 16 nM PAX C20 H27 N7 O20 P4 CC1=CN(C(=....
31 1QHC Ki = 27 nM PUA C19 H27 N7 O20 P4 c1nc(c2c(n....
32 3FL0 - CGP C19 H25 N8 O10 P c1nc2c(n1[....
33 4WYP Kd = 440 uM AMP C10 H14 N5 O7 P c1nc(c2c(n....
34 1O0M Ki = 7.1 uM U2P C9 H13 N2 O9 P C1=CN(C(=O....
35 2QCA - DGP C10 H14 N5 O7 P c1nc2c(n1[....
36 3EV5 - TMO C3 H9 N O C[N+](C)(C....
37 4S18 - 1PT C6 H14 N2 Pt C1CC[C@@H]....
38 1EOS - U2G C19 H24 N7 O13 P c1nc2c(n1[....
39 4RTE - CPT Cl2 H6 N2 Pt [NH3][Pt](....
40 1W4O Ki = 5.85 uM UA3 C9 H13 N2 O9 P C1=CN(C(=O....
41 1RNN - C5P C9 H14 N3 O8 P C1=CN(C(=O....
42 2XOG Ki = 370 uM SFB C20 H28 N8 O11 S c1nc(c2c(n....
43 1W4P Ki = 18 uM UM3 C9 H13 N2 O8 P C1[C@@H]([....
44 1AFL Ki = 520 nM ATR C10 H16 N5 O13 P3 c1nc(c2c(n....
45 3EV3 - TBU C4 H10 O CC(C)(C)O
46 3RID - CGP C19 H25 N8 O10 P c1nc2c(n1[....
47 1RPG - CPA C19 H25 N8 O9 P c1nc(c2c(n....
48 1WBU - WBU C4 H5 N3 O2 C1=C(C(=O)....
49 4G8Y Ki = 25.8 uM 0FT C13 H17 N5 O6 CC1=CN(C(=....
50 1JN4 Ki = 11.3 uM 139 C19 H25 N7 O14 P2 c1nc(c2c(n....
51 1O0N Ki = 82 uM U3P C9 H13 N2 O9 P C1=CN(C(=O....
52 1AFK Ki = 240 nM PAP C10 H16 N5 O13 P3 c1nc(c2c(n....
53 2XOI Ki = 370 uM SFB C20 H28 N8 O11 S c1nc(c2c(n....
54 1EOW - U2G C19 H24 N7 O13 P c1nc2c(n1[....
55 5OGH - C3P C9 H14 N3 O8 P C1=CN(C(=O....
56 5NA9 - QPT C6 H12 N2 O4 Pt C1CC2(C1)C....
57 1F0V - DC DG n/a n/a
58 2W5L Ki = 63 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
59 1RUV - UVC C9 H12 N2 O9 V C1=CN(C(=O....
60 1Z6S Ki = 63 uM AMP C10 H14 N5 O7 P c1nc(c2c(n....
61 4G90 Ki = 30.8 uM 0G0 C12 H14 F N5 O6 c1c(nnn1[C....
62 6F60 - DVW C27 H31 N7 O5 Pt CC1=CC=C2C....
63 2W5G Ki = 0.86 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
64 3D8Z Ki = 423 uM TXS C14 H21 N3 O4 CC1=CN(C(=....
65 5JLG - RU Ru [Ru+3]
66 11BA - UPA C19 H24 N7 O12 P c1nc(c2c(n....
67 1TQ9 - CPA C19 H25 N8 O9 P c1nc(c2c(n....
68 3DJO Ki = 40.8 uM U2P C9 H13 N2 O9 P C1=CN(C(=O....
69 1N3Z - U3P C9 H13 N2 O9 P C1=CN(C(=O....
70 3DJV Ki = 27.9 uM C3P C9 H14 N3 O8 P C1=CN(C(=O....
71 1R5C - CPA C19 H25 N8 O9 P c1nc(c2c(n....
72 3DJQ Ki = 1046.4 uM UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
73 3DJP Ki = 63.2 uM UA3 C9 H13 N2 O9 P C1=CN(C(=O....
74 3DJX Ki = 1557 uM C5P C9 H14 N3 O8 P C1=CN(C(=O....
75 11BG - U2G C19 H24 N7 O13 P c1nc2c(n1[....
50% Homology Family (77)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 4 families.
1 1Z6D Ki = 4.6 mM IMP C10 H13 N4 O8 P c1nc2c(n1[....
2 1O0H Ki = 1.2 uM ADP C10 H15 N5 O10 P2 c1nc(c2c(n....
3 1JVU - C2P C9 H14 N3 O8 P C1=CN(C(=O....
4 3D7B Ki = 203 uM U4S C13 H19 N3 O5 C1CCN(C1)C....
5 3FL1 - CGP C19 H25 N8 O10 P c1nc2c(n1[....
6 3D6Q Ki = 172 uM U3S C14 H21 N3 O5 C1CCN(CC1)....
7 3JW1 - U5P C9 H13 N2 O9 P C1=CN(C(=O....
8 3EV6 - RSF C6 H10 O3 C1CO[C@H]2....
9 2W5I Ki = 4.7 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
10 3D8Y Ki = 396 uM T3S C15 H23 N3 O4 CC1=CN(C(=....
11 3D6O Ki = 77 uM U1S C17 H25 N3 O7 CCOC(=O)C1....
12 3LXO Kd = 15 uM T3P C10 H15 N2 O8 P CC1=CN(C(=....
13 1O0O Ki = 8 uM A2P C10 H15 N5 O10 P2 c1nc(c2c(n....
14 1RPF - C3P C9 H14 N3 O8 P C1=CN(C(=O....
15 3D6P Ki = 179 uM U2S C13 H19 N3 O6 C1COCCN1C[....
16 4G8V Ki = 1.6 uM 0EY C12 H15 N5 O6 c1c(nnn1[C....
17 1RNC - 5GP C10 H14 N5 O8 P c1nc2c(n1[....
18 4WYZ Kd = 50 uM U3P C9 H13 N2 O9 P C1=CN(C(=O....
19 1ROB - C2P C9 H14 N3 O8 P C1=CN(C(=O....
20 1W4Q Ki = 5.5 uM UMF C9 H12 F N2 O8 P C1=CN(C(=O....
21 1O0F Ki = 5 uM A3P C10 H15 N5 O10 P2 c1nc(c2c(n....
22 3EV4 - ETF C2 H3 F3 O C(C(F)(F)F....
23 1RCA - CGP C19 H25 N8 O10 P c1nc2c(n1[....
24 1RND - DGP C10 H14 N5 O7 P c1nc2c(n1[....
25 4RSK Kd = 47.4 uM U3P C9 H13 N2 O9 P C1=CN(C(=O....
26 1RCN - DA DT DA DA n/a n/a
27 1RNM - C5P C9 H14 N3 O8 P C1=CN(C(=O....
28 2W5K Ki = 12 uM NDP C21 H30 N7 O17 P3 c1nc(c2c(n....
29 2G8R Ki = 103 uM N3E C15 H21 N3 O7 C1CN(CCC1C....
30 1U1B Kd = 16 nM PAX C20 H27 N7 O20 P4 CC1=CN(C(=....
31 1QHC Ki = 27 nM PUA C19 H27 N7 O20 P4 c1nc(c2c(n....
32 3FL0 - CGP C19 H25 N8 O10 P c1nc2c(n1[....
33 4WYP Kd = 440 uM AMP C10 H14 N5 O7 P c1nc(c2c(n....
34 1O0M Ki = 7.1 uM U2P C9 H13 N2 O9 P C1=CN(C(=O....
35 2QCA - DGP C10 H14 N5 O7 P c1nc2c(n1[....
36 3EV5 - TMO C3 H9 N O C[N+](C)(C....
37 4S18 - 1PT C6 H14 N2 Pt C1CC[C@@H]....
38 1EOS - U2G C19 H24 N7 O13 P c1nc2c(n1[....
39 4RTE - CPT Cl2 H6 N2 Pt [NH3][Pt](....
40 1W4O Ki = 5.85 uM UA3 C9 H13 N2 O9 P C1=CN(C(=O....
41 1RNN - C5P C9 H14 N3 O8 P C1=CN(C(=O....
42 2XOG Ki = 370 uM SFB C20 H28 N8 O11 S c1nc(c2c(n....
43 1W4P Ki = 18 uM UM3 C9 H13 N2 O8 P C1[C@@H]([....
44 1AFL Ki = 520 nM ATR C10 H16 N5 O13 P3 c1nc(c2c(n....
45 3EV3 - TBU C4 H10 O CC(C)(C)O
46 3RID - CGP C19 H25 N8 O10 P c1nc2c(n1[....
47 1RPG - CPA C19 H25 N8 O9 P c1nc(c2c(n....
48 1WBU - WBU C4 H5 N3 O2 C1=C(C(=O)....
49 4G8Y Ki = 25.8 uM 0FT C13 H17 N5 O6 CC1=CN(C(=....
50 1JN4 Ki = 11.3 uM 139 C19 H25 N7 O14 P2 c1nc(c2c(n....
51 1O0N Ki = 82 uM U3P C9 H13 N2 O9 P C1=CN(C(=O....
52 1AFK Ki = 240 nM PAP C10 H16 N5 O13 P3 c1nc(c2c(n....
53 2XOI Ki = 370 uM SFB C20 H28 N8 O11 S c1nc(c2c(n....
54 1EOW - U2G C19 H24 N7 O13 P c1nc2c(n1[....
55 5OGH - C3P C9 H14 N3 O8 P C1=CN(C(=O....
56 5NA9 - QPT C6 H12 N2 O4 Pt C1CC2(C1)C....
57 1F0V - DC DG n/a n/a
58 2W5L Ki = 63 uM NAP C21 H28 N7 O17 P3 c1cc(c[n+]....
59 1RUV - UVC C9 H12 N2 O9 V C1=CN(C(=O....
60 1Z6S Ki = 63 uM AMP C10 H14 N5 O7 P c1nc(c2c(n....
61 4G90 Ki = 30.8 uM 0G0 C12 H14 F N5 O6 c1c(nnn1[C....
62 6F60 - DVW C27 H31 N7 O5 Pt CC1=CC=C2C....
63 2W5G Ki = 0.86 uM ATP C10 H16 N5 O13 P3 c1nc(c2c(n....
64 3D8Z Ki = 423 uM TXS C14 H21 N3 O4 CC1=CN(C(=....
65 5JLG - RU Ru [Ru+3]
66 11BA - UPA C19 H24 N7 O12 P c1nc(c2c(n....
67 1TQ9 - CPA C19 H25 N8 O9 P c1nc(c2c(n....
68 3DJO Ki = 40.8 uM U2P C9 H13 N2 O9 P C1=CN(C(=O....
69 1N3Z - U3P C9 H13 N2 O9 P C1=CN(C(=O....
70 3DJV Ki = 27.9 uM C3P C9 H14 N3 O8 P C1=CN(C(=O....
71 1R5C - CPA C19 H25 N8 O9 P c1nc(c2c(n....
72 3DJQ Ki = 1046.4 uM UDP C9 H14 N2 O12 P2 C1=CN(C(=O....
73 3DJP Ki = 63.2 uM UA3 C9 H13 N2 O9 P C1=CN(C(=O....
74 3DJX Ki = 1557 uM C5P C9 H14 N3 O8 P C1=CN(C(=O....
75 11BG - U2G C19 H24 N7 O13 P c1nc2c(n1[....
76 5ARK - UMP C9 H13 N2 O8 P C1[C@@H]([....
77 2RNF - UM3 C9 H13 N2 O8 P C1[C@@H]([....
Polypharmacology
Similar Ligands
Ligand no: 1; Ligand: UPA; Similar ligands found: 255
No: Ligand ECFP6 Tc MDL keys Tc
1 UPA 1 1
2 UP5 0.711712 0.986667
3 4TC 0.699115 0.961039
4 U2G 0.686957 0.925
5 APU 0.678261 0.960526
6 139 0.652542 0.961538
7 U A 0.634146 0.948052
8 25A 0.626168 0.907895
9 A U 0.608333 0.960526
10 25L 0.59292 0.921053
11 A2D 0.58 0.933333
12 ADP 0.578431 0.907895
13 AN2 0.572816 0.896104
14 A22 0.572727 0.921053
15 PRX 0.571429 0.8375
16 BA3 0.568627 0.933333
17 SAP 0.566038 0.8625
18 AGS 0.566038 0.8625
19 A 0.565657 0.881579
20 AMP 0.565657 0.881579
21 B4P 0.563107 0.933333
22 AP5 0.563107 0.933333
23 ADQ 0.5625 0.934211
24 ATP 0.561905 0.907895
25 HEJ 0.561905 0.907895
26 AT4 0.557692 0.873418
27 5FA 0.556604 0.907895
28 AQP 0.556604 0.907895
29 M33 0.552381 0.896104
30 CA0 0.552381 0.909091
31 ADX 0.552381 0.821429
32 ACP 0.54717 0.884615
33 50T 0.54717 0.871795
34 ATF 0.545455 0.873418
35 SRA 0.544554 0.8375
36 CG2 0.543307 0.925
37 AR6 0.542056 0.907895
38 APR 0.542056 0.907895
39 ACQ 0.541284 0.884615
40 ANP 0.541284 0.884615
41 U A A U 0.540741 0.948052
42 9X8 0.53913 0.8625
43 AD9 0.537037 0.884615
44 ABM 0.533981 0.858974
45 A U C C 0.532374 0.935897
46 G3A 0.528926 0.8875
47 TAT 0.527273 0.873418
48 T99 0.527273 0.873418
49 6YZ 0.526786 0.884615
50 5SV 0.526316 0.797619
51 PUA 0.526316 0.924051
52 OAD 0.525862 0.909091
53 G5P 0.52459 0.8875
54 A12 0.52381 0.873418
55 AP2 0.52381 0.873418
56 5AL 0.522523 0.896104
57 A3R 0.521739 0.875
58 A G U 0.517483 0.901235
59 APC 0.513761 0.873418
60 SRP 0.513274 0.897436
61 A G U U 0.510204 0.901235
62 AU1 0.509259 0.884615
63 4AD 0.508621 0.886076
64 PAJ 0.508621 0.876543
65 A1R 0.508621 0.875
66 4UV 0.508197 0.910256
67 3OD 0.504202 0.909091
68 BIS 0.504202 0.851852
69 1ZZ 0.504202 0.811765
70 OOB 0.5 0.921053
71 4UU 0.5 0.910256
72 ADP BMA 0.5 0.909091
73 8QN 0.5 0.896104
74 T5A 0.5 0.902439
75 6V0 0.496063 0.935897
76 GTA 0.496 0.855422
77 PR8 0.495798 0.843373
78 WAQ 0.495798 0.851852
79 AMO 0.495726 0.897436
80 RBY 0.495495 0.873418
81 ADV 0.495495 0.873418
82 OMR 0.492188 0.823529
83 TXE 0.492188 0.948052
84 FYA 0.491667 0.871795
85 PTJ 0.491667 0.841463
86 AHX 0.491525 0.8875
87 00A 0.491525 0.875
88 DLL 0.491525 0.921053
89 U2P 0.49 0.828947
90 SFB 0.488372 0.808989
91 3UK 0.487395 0.909091
92 A4P 0.484615 0.880952
93 TXD 0.484375 0.923077
94 NAI 0.484375 0.948052
95 9SN 0.483607 0.864198
96 LAD 0.483333 0.853659
97 B5V 0.483333 0.897436
98 ATR 0.482143 0.881579
99 ADP PO3 0.482143 0.881579
100 B5Y 0.479675 0.886076
101 B5M 0.479675 0.886076
102 ME8 0.479339 0.811765
103 NB8 0.479339 0.864198
104 TXA 0.479339 0.897436
105 MAP 0.478632 0.8625
106 UPU 0.477477 0.866667
107 5AS 0.477064 0.755556
108 AP0 0.476923 0.911392
109 AFH 0.47619 0.876543
110 LMS 0.47619 0.77907
111 GAP 0.473684 0.884615
112 NAX 0.472868 0.9125
113 4UW 0.472868 0.876543
114 SON 0.472727 0.873418
115 DQV 0.472441 0.946667
116 A2R 0.470085 0.896104
117 A2P 0.46789 0.868421
118 FA5 0.467742 0.897436
119 YAP 0.467742 0.886076
120 JB6 0.467213 0.851852
121 G A A A 0.466667 0.864198
122 ALF ADP 0.465517 0.817073
123 ADP ALF 0.465517 0.817073
124 GA7 0.464567 0.897436
125 XAH 0.464 0.833333
126 NA7 0.46281 0.873418
127 9ZD 0.462185 0.851852
128 9ZA 0.462185 0.851852
129 VO4 ADP 0.461538 0.871795
130 ADP VO4 0.461538 0.871795
131 80F 0.459854 0.879518
132 XYA 0.459184 0.813333
133 ADN 0.459184 0.813333
134 RAB 0.459184 0.813333
135 A A 0.459016 0.883117
136 TYM 0.458015 0.897436
137 LAQ 0.457364 0.811765
138 PAP 0.45614 0.894737
139 GPG 0.455285 0.9
140 ADJ 0.455224 0.845238
141 A3P 0.454545 0.881579
142 YLP 0.453846 0.813953
143 48N 0.453846 0.864198
144 DAL AMP 0.453782 0.871795
145 3AM 0.45283 0.868421
146 MYR AMP 0.451613 0.790698
147 NXX 0.450382 0.922078
148 DND 0.450382 0.922078
149 A C A C 0.446043 0.935897
150 4TA 0.445255 0.86747
151 A G 0.445255 0.851852
152 PPS 0.444444 0.8
153 ATP A A A 0.444444 0.894737
154 EAD 0.444444 0.9125
155 YLB 0.443609 0.813953
156 2AM 0.443396 0.881579
157 U A G G 0.442029 0.851852
158 AOC 0.440367 0.792208
159 ODP 0.437956 0.924051
160 UCG 0.4375 0.876543
161 IOT 0.437037 0.804598
162 2A5 0.434783 0.860759
163 BTX 0.434783 0.813953
164 YLC 0.432836 0.855422
165 P1H 0.432432 0.890244
166 BT5 0.431655 0.804598
167 A4D 0.431373 0.789474
168 AR6 AR6 0.430769 0.883117
169 AYB 0.430657 0.804598
170 CNA 0.430657 0.922078
171 ITT 0.429825 0.857143
172 8X1 0.429752 0.75
173 PUP 0.429752 0.797468
174 Z5A 0.427586 0.837209
175 G5A 0.42735 0.775281
176 TYR AMP 0.426357 0.8625
177 U A C C 0.425532 0.923077
178 NAJ PZO 0.425532 0.8875
179 0WD 0.42446 0.935897
180 COD 0.42446 0.806818
181 NAD 0.42446 0.921053
182 P5A 0.424 0.741935
183 V3L 0.423729 0.883117
184 YLA 0.423358 0.835294
185 NDP 0.423358 0.935897
186 G U 0.423358 0.888889
187 5N5 0.421569 0.789474
188 7D5 0.420561 0.822785
189 TXP 0.42029 0.911392
190 ARG AMP 0.419847 0.802326
191 7MD 0.419847 0.855422
192 7D3 0.419643 0.848101
193 YLY 0.41958 0.804598
194 A3D 0.41844 0.909091
195 OVE 0.418182 0.848101
196 UDP 0.418182 0.842105
197 TSB 0.418033 0.793103
198 5CA 0.418033 0.795455
199 5CD 0.417476 0.753247
200 7D4 0.417391 0.848101
201 F2R 0.417266 0.835294
202 TAD 0.416667 0.853659
203 GDU 0.416667 0.868421
204 GUD 0.416667 0.868421
205 AV2 0.416667 0.835443
206 UFM 0.416667 0.868421
207 3DH 0.416667 0.725
208 A5A 0.416667 0.781609
209 UPG 0.416667 0.868421
210 AMP DBH 0.415385 0.860759
211 NAQ 0.413793 0.864198
212 AHZ 0.413534 0.790698
213 SSA 0.413223 0.795455
214 NPW 0.413043 0.901235
215 FDA 0.411765 0.870588
216 62F 0.411392 0.878049
217 NSS 0.41129 0.775281
218 LPA AMP 0.410448 0.790698
219 NZQ 0.410072 0.924051
220 VMS 0.409836 0.764045
221 54H 0.409836 0.764045
222 52H 0.409836 0.755556
223 6FA 0.409091 0.857143
224 6AD 0.408333 0.831325
225 NVA LMS 0.408 0.731183
226 NJP 0.407143 0.910256
227 UTP 0.40708 0.842105
228 NAE 0.406897 0.886076
229 U2F 0.406504 0.825
230 UPF 0.406504 0.825
231 53H 0.406504 0.755556
232 EP4 0.40566 0.707317
233 6RE 0.405405 0.714286
234 660 0.404959 0.857143
235 URM 0.404959 0.857143
236 LEU LMS 0.404762 0.731183
237 AF3 ADP 3PG 0.404412 0.809524
238 NAJ PYZ 0.40411 0.845238
239 NDE 0.403974 0.897436
240 FAD 0.403846 0.86747
241 SFD 0.403846 0.75
242 FAS 0.403846 0.86747
243 MAO 0.403509 0.715909
244 HFD 0.403361 0.8625
245 U5P 0.401869 0.828947
246 M2T 0.401869 0.690476
247 U 0.401869 0.828947
248 DTA 0.401869 0.759494
249 7C5 0.401515 0.790123
250 DZD 0.401408 0.876543
251 ZID 0.401361 0.909091
252 8PZ 0.4 0.795455
253 DSZ 0.4 0.775281
254 M24 0.4 0.843373
255 LSS 0.4 0.73913
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 3DJV; Ligand: C3P; Similar sites found with APoc: 1
This union binding pocket(no: 1) in the query (biounit: 3djv.bio1) has 50 residues
No: Leader PDB Ligand Sequence Similarity
1 2GMK AMP 32.6923
Pocket No.: 2; Query (leader) PDB : 3DJV; Ligand: C3P; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 2) in the query (biounit: 3djv.bio1) has 52 residues
No: Leader PDB Ligand Sequence Similarity
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