home
faq
browse
search
download
1.- Oxidoreductases
2.- Transferases
3.- Hydrolases
4.- Lyases
5.- Isomerases
6.- Ligases
Unclassified Enzymes
Binding
Folding Proteins
Immunological Proteins
Mobility/Motility
Other
Toxins/Viral Proteins
Transcription/Translation
Transport
Cell Cycle
Signal Hormone
Structural
PDB Protein Homology Class
TOXIN_VIRAL
Families belonging to this class:
90% Homology Family
Leader:
1MD2
CHOLERA TOXIN B-PENTAMER WITH DECAVALENT LIGAND BMSC-0013
PDB id
Binding data
Representative ligand
1MD2
kd ~ 40.0 nM
233-SQ
1CT1
GAL-NGA-GAL-GLC-SIA
1EEI
IC50 = 0.7 mM
GAA
1G8Z
GAL
1JR0
kd = 12.0 uM
A24
1LLR
FNG-LNQ
1PZJ
IC50 = 0.32 mM
J15
1PZK
IC50 = 0.2 mM
J12
1RCV
IC50 = 29.0 uM
BV1
1RD9
IC50 = 13.0 uM
BV2
1RDP
IC50 = 9.0 uM
BV3
1RF2
IC50 = 17.0 uM
BV4
2CHB
GAL-NGA-GAL-SIA
3CHB
GAL-NGA-GAL-GLC-SIA
3EFX
BGC-FUC-GAL-FUC-A2G
90% Homology Family
Leader:
1JQY
HEAT-LABILE ENTEROTOXIN B-PENTAMER WITH LIGAND BMSC-0010
PDB id
Binding data
Representative ligand
1JQY
ki = 12.0 uM
A32
1DJR
GAL-BEZ
1EEF
IC50 = 1.2 mM
GAL
1EFI
IC50 = 12.0 mM
GAT
1FD7
IC50 = 14.0 mM
AI1
1LT5
TDG
1LT6
GAA
1PZI
Kd = 60.0 uM
1DM
90% Homology Family
Leader:
1C4Q
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (F30A/W34A
) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
PDB id
Binding data
Representative ligand
1C4Q
GAL-GAL-GLC
1CQF
GAL-GLC
1D1I
GAL-GAL
1D1K
GAL-GLC
1QNU
GAL-GAL-GLC-EMB-MEC
90% Homology Family
Leader:
1TYU
STRUCTURE OF TAILSPIKE-PROTEIN
PDB id
Binding data
Representative ligand
1TYU
GAL-MAN-TYV-RAM-GAL-MAN-TYV-RAM
1TYW
GAL-MAN-TYV-RAM-GAL-MAN-TYV-RAM-GLC
1TYX
GAL-MAN-ABE-RAM-GAL-MAN-ABE-RAM
90% Homology Family
Leader:
3DWQ
CRYSTAL STRUCTURE OF THE A-SUBUNIT OF THE AB5 TOXIN FROM E.
PDB id
Binding data
Representative ligand
3DWQ
Ki ~ 2.0 mM
NGC-GAL-NGA-POL-AZI
3DWP
NGC
90% Homology Family
Leader:
2VL8
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF LETHAL TOXIN
PDB id
Binding data
Representative ligand
2VL8
ic50 ~ 30.0 uM
CTS
2VKH
UPG
90% Homology Family
Leader:
1YVZ
HEPATITIS C VIRUS RNA POLYMERASE GENOTYPE 2A IN COMPLEX
PDB id
Binding data
Representative ligand
1YVZ
IC50 = 4.4 uM
JPC
1YVX
IC50 = 8.0 uM
IPC
90% Homology Family
Leader:
1XT3
STRUCTURE BASIS OF VENOM CITRATE-DEPENDENT HEPARIN SULFATE-
PDB id
Binding data
Representative ligand
1XT3
Kd = 2.01 uM
IDU-SGN-IDU-SGN-IDU-SGN
2BHI
SFT
90% Homology Family
Leader:
1UXA
ADENOVIRUS AD37 FIBRE HEAD IN COMPLEX WITH SIALYL-LACTOSE
PDB id
Binding data
Representative ligand
1UXA
Kd = 5.0 mM
SIA-GAL
1UXB
Kd = 7.0 mM
SIA-GAL
90% Homology Family
Leader:
1SVM
CO-CRYSTAL STRUCTURE OF SV40 LARGE T ANTIGEN HELICASE
PDB id
Binding data
Representative ligand
1SVM
ATP
1SVL
ADP
90% Homology Family
Leader:
1RVX
1934 H1 HEMAGGLUTININ IN COMPLEX WITH LSTA
PDB id
Binding data
Representative ligand
1RVX
NAG
1RVZ
SIA-GAL-NAG
90% Homology Family
Leader:
1RV0
1930 SWINE H1 HEMAGGLUTININ COMPLEXED WITH LSTA
PDB id
Binding data
Representative ligand
1RV0
NAG
1RVT
SIA-GAL-NAG-GAL-GLC
90% Homology Family
Leader:
1M5J
CRYSTAL STRUCTURE OF CYANOVIRIN-N COMPLEXED TO
A SYNTHETIC HEXAMANNOSIDE
PDB id
Binding data
Representative ligand
1M5J
kd = 2.6 uM
MAN-MAN-MAN-OPM-MAN-MAN
1M5M
kd = 0.27 M
NAG-NAG-MAN-MAN-MAN-MAN-MAN-MAN-MAN-MAN-MAN
90% Homology Family
Leader:
1LTI
HEAT-LABILE ENTEROTOXIN (LT-I) COMPLEX WITH T-ANTIGEN
PDB id
Binding data
Representative ligand
1LTI
GAL
1LTA
GAL
90% Homology Family
Leader:
1LT3
HEAT-LABILE ENTEROTOXIN DOUBLE MUTANT N40C/G166C
PDB id
Binding data
Representative ligand
1LT3
GAL-GLC
1LT4
GAL-GLC
90% Homology Family
Leader:
1JSO
STRUCTURE OF AVIAN H5 HAEMAGGLUTININ BOUND TO
LSTC RECEPTOR ANALOG
PDB id
Binding data
Representative ligand
1JSO
SIA
1JSN
SIA-GAL-NAG
90% Homology Family
Leader:
1JSH
CRYSTAL STRUCTURE OF H9 HAEMAGGLUTININ COMPLEXED
WITH LSTA RECEPTOR ANALOG
PDB id
Binding data
Representative ligand
1JSH
SIA-GAL
1JSI
SIA-GAL-NAG-GAL-GLC
90% Homology Family
Leader:
1GIQ
CRYSTAL STRUCTURE OF THE ENZYMATIC COMPONET OF
IOTA-TOXIN FROM CLOSTRIDIUM PERFRINGENS WITH NADH
PDB id
Binding data
Representative ligand
1GIQ
NAD
1GIR
NDP
90% Homology Family
Leader:
1LRI
BETA-CRYPTOGEIN-CHOLESTEROL COMPLEX
PDB id
Binding data
Representative ligand
1LRI
CLR
1BXM
ERG
90% Homology Family
Leader:
3LKF
LEUKOCIDIN F (HLGB) FROM STAPHYLOCOCCUS AUREUS
WITH PHOSPHOCHOLINE BOUND
PDB id
Binding data
Representative ligand
3LKF
POC
90% Homology Family
Leader:
3EEB
STRUCTURE OF THE V. CHOLERAE RTX CYSTEINE PROTEASE DOMAIN
PDB id
Binding data
Representative ligand
3EEB
Kd = 1.3 uM
IHP
90% Homology Family
Leader:
2Z8L
CRYSTAL STRUCTURE OF THE STAPHYLOCOCCAL SUPERANTIGEN-LIKE
PDB id
Binding data
Representative ligand
2Z8L
NAG-FUC-SIA-GAL
90% Homology Family
Leader:
2Q6M
CATALYTIC FRAGMENT OF CHOLIX TOXIN FROM VIBRIO CHOLERAE IN
PDB id
Binding data
Representative ligand
2Q6M
Kd = 0.51 uM
P34
90% Homology Family
Leader:
2NUN
THE STRUCTURE OF THE TYPE III EFFECTOR AVRB COMPLEXED WITH
PDB id
Binding data
Representative ligand
2NUN
ADP
90% Homology Family
Leader:
2GWL
CRYSTAL STRUCTURE OF THE SALMONELLA SPVB ATR
DOMAIN IN COMPLEX WITH NADH
PDB id
Binding data
Representative ligand
2GWL
NAD
90% Homology Family
Leader:
2G7C
CLOSTRIDIUM DIFFICILE TOXIN A FRAGMENT BOUND
TO AGAL(1,3) BGAL(1,4)BGLCNAC
PDB id
Binding data
Representative ligand
2G7C
GLA-GAL-NAG
90% Homology Family
Leader:
2BOS
A MUTANT SHIGA-LIKE TOXIN IIE BOUND TO ITS RECEPTOR
PDB id
Binding data
Representative ligand
2BOS
GAL-GAL-GLC-BUT
90% Homology Family
Leader:
1ZBA
FOOT-AND-MOUTH DISEASE VIRUS SEROTYPE A1061 COMPLEXED WITH
PDB id
Binding data
Representative ligand
1ZBA
SGN-IDU-SGN
90% Homology Family
Leader:
1VPS
POLYOMAVIRUS VP1 PENTAMER COMPLEXED WITH A DISIALYLATED
HEXASACCHARIDE
PDB id
Binding data
Representative ligand
1VPS
SIA-GAL-NAG-SIA
90% Homology Family
Leader:
1QQP
FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE
RECEPTOR COMPLEX.
PDB id
Binding data
Representative ligand
1QQP
IDU-SGN-IDU-SGN-IDU
90% Homology Family
Leader:
1PVC
REFINEMENT OF THE SABIN STRAIN OF TYPE 3 POLIOVIRUS
AT 2.4 ANGSTROMS AND THE CRYSTAL STRUCTURES
OF ITS VARIANTS AT 2.9 ANGSTROMS RESOLUTION
PDB id
Binding data
Representative ligand
1PVC
ILE-SER-GLU-VAL
90% Homology Family
Leader:
1OKE
CRYSTAL STRUCTURE OF THE DENGUE 2 VIRUS ENVELOPE
PROTEIN IN COMPLEX WITH N-OCTYL-BETA-D-GLUCOSIDE
PDB id
Binding data
Representative ligand
1OKE
BOG
90% Homology Family
Leader:
1ND2
THE STRUCTURE OF RHINOVIRUS 16
PDB id
Binding data
Representative ligand
1ND2
MYR
90% Homology Family
Leader:
1NCQ
THE STRUCTURE OF HRV14 WHEN COMPLEXED WITH PLECONARIL, AN
PDB id
Binding data
Representative ligand
1NCQ
W11
90% Homology Family
Leader:
1MWH
REOVIRUS POLYMERASE LAMBDA3 BOUND TO MRNA CAP ANALOG
PDB id
Binding data
Representative ligand
1MWH
GTG
90% Homology Family
Leader:
1MG1
HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA
PDB id
Binding data
Representative ligand
1MG1
MAL
90% Homology Family
Leader:
1MFI
CRYSTAL STRUCTURE OF MACROPHAGE MIGRATION INHIBITORY
FACTOR COMPLEXED WITH (E)-2-FLUORO-P-HYDROXYCINNAMATE
PDB id
Binding data
Representative ligand
1MFI
ki = 2.6 uM
FHC
90% Homology Family
Leader:
1M3Y
THE STRUCTURE OF MAJOR CAPSID PROTEIN OF A LARGE
, LIPID CONTAINING, DNA VIRUS
PDB id
Binding data
Representative ligand
1M3Y
NAG
90% Homology Family
Leader:
1LVM
CATALYTICALLY ACTIVE TOBACCO ETCH VIRUS PROTEASE
COMPLEXED WITH PRODUCT
PDB id
Binding data
Representative ligand
1LVM
ACE-GLU-ASN-LEU-TYR-PHE-GLN-SER-GLY-THR
90% Homology Family
Leader:
1LVB
CATALYTICALLY INACTIVE TOBACCO ETCH VIRUS PROTEASE
COMPLEXED WITH SUBSTRATE
PDB id
Binding data
Representative ligand
1LVB
THR-GLU-ASN-LEU-TYR-PHE-GLN-SER-GLY-THR
90% Homology Family
Leader:
1LTT
LACTOSE BINDING TO HEAT-LABILE ENTEROTOXIN REVEALED
BY X-RAY CRYSTALLOGRAPHY
PDB id
Binding data
Representative ligand
1LTT
GAL-GLC
90% Homology Family
Leader:
1KQR
CRYSTAL STRUCTURE OF THE RHESUS ROTAVIRUS VP4
SIALIC ACID BINDING DOMAIN IN COMPLEX WITH 2
-O-METHYL-ALPHA-D-N-ACETYL NEURAMINIC ACID
PDB id
Binding data
Representative ligand
1KQR
MNA
90% Homology Family
Leader:
1H2C
EBOLA VIRUS MATRIX PROTEIN VP40 N-TERMINAL DOMAIN
IN COMPLEX WITH RNA (HIGH-RESOLUTION VP40[55-194] VARIANT).
PDB id
Binding data
Representative ligand
1H2C
U-G-A
90% Homology Family
Leader:
1DTP
THE STRUCTURE OF THE ISOLATED CATALYTIC DOMAIN
OF DIPHTHERIA TOXIN
PDB id
Binding data
Representative ligand
1DTP
APU
90% Homology Family
Leader:
1BAI
STRUCTURAL BASIS FOR SPECIFICITY OF RETROVIRAL PROTEASES
PDB id
Binding data
Representative ligand
1BAI
ki = 20.0 nM
ARG-VAL-LEU-PHE-GLU-ALA-NLE-NH2