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1.- Oxidoreductases
2.- Transferases
3.- Hydrolases
4.- Lyases
5.- Isomerases
6.- Ligases
Unclassified Enzymes
Binding
Folding Proteins
Immunological Proteins
Mobility/Motility
Other
Toxins/Viral Proteins
Transcription/Translation
Transport
Cell Cycle
Signal Hormone
Structural
PDB Protein Homology Class
ENZYME
Families belonging to this class:
90% Homology Family
Leader:
2AQJ
THE STRUCTURE OF TRYPTOPHAN 7-HALOGENASE (PRNA
) SUGGESTS A MECHANISM FOR REGIOSELECTIVE CHLORINATION
PDB id
Binding data
Representative ligand
2AQJ
FAD
2APG
FAD
2AR8
FAD
2JKC
TRP
90% Homology Family
Leader:
2V0C
LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED
PDB id
Binding data
Representative ligand
2V0C
ANZ
1H3N
LEU-LMS
1OBC
LEU-NVA-2AD-LMS
1OBH
NVA-LMS-NVA-LMS
90% Homology Family
Leader:
3DR4
GDP-PEROSAMINE SYNTHASE K186A MUTANT FROM CAULOBACTER
PDB id
Binding data
Representative ligand
3DR4
G4M
3BN1
AKG
3DR7
GPD
90% Homology Family
Leader:
2E4G
REBH WITH BOUND L-TRP
PDB id
Binding data
Representative ligand
2E4G
TRP
2OA1
TRP
2OAL
FAD
90% Homology Family
Leader:
2FSH
COMPLEX SECA:AMP-PNP FROM ESCHERICHIA COLI
PDB id
Binding data
Representative ligand
2FSH
ANP
2FSG
ATP
2FSI
ADP
90% Homology Family
Leader:
2FCU
SYRB2 WITH ALPHA-KETOGLUTARATE
PDB id
Binding data
Representative ligand
2FCU
AKG
2FCT
AKG
2FCV
AKG
90% Homology Family
Leader:
1UPB
CARBOXYETHYLARGININE SYNTHASE FROM STREPTOMYCES
PDB id
Binding data
Representative ligand
1UPB
TPP
1UPA
TPP
1UPC
TPP
90% Homology Family
Leader:
1NWU
CRYSTAL STRUCTURE OF HUMAN CARTILAGE GP39 (HC-GP39) IN
PDB id
Binding data
Representative ligand
1NWU
NAG-NAG-NAG-NAG
1HJW
NAG-NAG-NAG-NAG-NAG
1NWT
NAG-NAG-NAG-NAG-NAG-NAG
90% Homology Family
Leader:
3CIW
X-RAY STRUCTURE OF THE [FEFE]-HYDROGENASE MATURASE HYDE
PDB id
Binding data
Representative ligand
3CIW
SAH
3CIX
SAH
90% Homology Family
Leader:
2QJN
CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE FROM
PDB id
Binding data
Representative ligand
2QJN
KDG
2QJM
CS2
90% Homology Family
Leader:
2Q6K
SALL WITH ADENOSINE
PDB id
Binding data
Representative ligand
2Q6K
ADN
2Q6O
SAM
90% Homology Family
Leader:
2P8B
CRYSTAL STRUCTURE OF N-SUCCINYL ARG/LYS RACEMASE FROM
PDB id
Binding data
Representative ligand
2P8B
NSK
2P8C
SUG
90% Homology Family
Leader:
2O0J
T4 GP17 ATPASE DOMAIN MUTANT COMPLEXED WITH ADP
PDB id
Binding data
Representative ligand
2O0J
ADP
2O0H
ATP
90% Homology Family
Leader:
2HF9
CRYSTAL STRUCTURE OF HYPB FROM METHANOCALDOCOCCUS
JANNASCHII IN THE TRIPHOSPHATE FORM
PDB id
Binding data
Representative ligand
2HF9
Kd = 3.4 uM
GSP
2HF8
Kd = 3.4 uM
GSP
90% Homology Family
Leader:
2F99
CRYSTAL STRUCTURE OF THE POLYKETIDE CYCLASE AKNH
WITH BOUND SUBSTRATE AND PRODUCT ANALOGUE: IMPLICATIONS
FOR CATALYTIC MECHANISM AND PRODUCT STEREOSELECTIVITY.
PDB id
Binding data
Representative ligand
2F99
AKV
2F98
NGV
90% Homology Family
Leader:
2D3M
PENTAKETIDE CHROMONE SYNTHASE COMPLEXED WITH COENZYME A
PDB id
Binding data
Representative ligand
2D3M
COA
2D52
COA
90% Homology Family
Leader:
1UUY
STRUCTURE OF A MOLYBDOPTERIN-BOUND CNX1G DOMAIN LINKS
PDB id
Binding data
Representative ligand
1UUY
MTE-AMP
1UUX
MTE
90% Homology Family
Leader:
1TQ4
CRYSTAL STRUCTURE OF IIGP1: A PARADIGM FOR INTERFERON
PDB id
Binding data
Representative ligand
1TQ4
Kd = 0.64 uM
GDP
1TPZ
Kd = 0.64 uM
GDP
90% Homology Family
Leader:
1NX8
STRUCTURE OF CARBAPENEM SYNTHASE (CARC) COMPLEXED
WITH N-ACETYL PROLINE
PDB id
Binding data
Representative ligand
1NX8
2OG
1NX4
2OG
90% Homology Family
Leader:
3DFK
THE CRYSTAL STRUCTURE OF TEICOPLANIN PSEUDOAGLYCONE
PDB id
Binding data
Representative ligand
3DFK
DKA
90% Homology Family
Leader:
3CBC
CRYSTAL STRUCTURE OF SIDEROCALIN (NGAL, LIPOCALIN 2) Y106F
PDB id
Binding data
Representative ligand
3CBC
DBS
90% Homology Family
Leader:
3C1O
THE MULTIPLE PHENYLPROPENE SYNTHASES IN BOTH CLARKIA
PDB id
Binding data
Representative ligand
3C1O
NAP
90% Homology Family
Leader:
3BM5
CRYSTAL STRUCTURE OF O-ACETYL-SERINE SULFHYDRYLASE FROM
PDB id
Binding data
Representative ligand
3BM5
Kd = 1.1 mM
CYS
90% Homology Family
Leader:
3BFV
CRYSTAL STRUCTURE OF THE CHIMERICAL PROTEIN CAPAB
PDB id
Binding data
Representative ligand
3BFV
ADP
90% Homology Family
Leader:
2ZIF
CRYSTAL STRUCTURE OF TTHA0409, PUTATIVE DNA MODIFICATION
PDB id
Binding data
Representative ligand
2ZIF
Kd = 43.0 uM
SAM
90% Homology Family
Leader:
2Z1U
CRYSTAL STRUCTURE OF HYDROGENASE MATURATION PROTEIN HYPE IN
PDB id
Binding data
Representative ligand
2Z1U
ATP
90% Homology Family
Leader:
2UVF
STRUCTURE OF YERSINIA ENTEROCOLITICA FAMILY 28
PDB id
Binding data
Representative ligand
2UVF
AD0
90% Homology Family
Leader:
2QGI
THE UDP COMPLEX STRUCTURE OF THE SIXTH GENE PRODUCT OF THE
PDB id
Binding data
Representative ligand
2QGI
UDP
90% Homology Family
Leader:
2Q8Z
CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM OROTIDINE 5'-
PDB id
Binding data
Representative ligand
2Q8Z
Ki = 2.1 uM
NUP
90% Homology Family
Leader:
2Q1A
2-KETO-3-DEOXY-D-ARABINONATE DEHYDRATASE COMPLEXED WITH
PDB id
Binding data
Representative ligand
2Q1A
2KT
90% Homology Family
Leader:
2PO3
CRYSTAL STRUCTURE ANALYSIS OF DESI IN THE PRESENCE OF ITS
PDB id
Binding data
Representative ligand
2PO3
T4K
90% Homology Family
Leader:
2MJP
STRUCTURE-BASED IDENTIFICATION OF THE BIOCHEMICAL
FUNCTION OF A HYPOTHETICAL PROTEIN FROM METHANOCOCCUS
JANNASCHII:MJ0226
PDB id
Binding data
Representative ligand
2MJP
ANP
90% Homology Family
Leader:
2J1P
GERANYLGERANYL DIPHOSPHATE SYNTHASE FROM SINAPIS ALBA IN
PDB id
Binding data
Representative ligand
2J1P
GRG
90% Homology Family
Leader:
2IUT
P. AERUGINOSA FTSK MOTOR DOMAIN, DIMERIC
PDB id
Binding data
Representative ligand
2IUT
ATG
90% Homology Family
Leader:
2FN1
CRYSTAL STRUCTURES OF YERSINIA ENTEROCOLITICA
SALICYLATE SYNTHASE (IRP9) IN COMPLEX WITH
THE REACTION PRODUCTS SALICYLATE AND PYRUVATE
PDB id
Binding data
Representative ligand
2FN1
SAL
90% Homology Family
Leader:
2FAV
CRYSTAL STRUCTURE OF SARS MACRO DOMAIN IN COMPLEX
WITH ADP- RIBOSE AT 1.8 A RESOLUTION
PDB id
Binding data
Representative ligand
2FAV
Kd = 24.0 uM
APR
90% Homology Family
Leader:
1ZGD
CHALCONE REDUCTASE COMPLEXED WITH NADP+ AT 1.7 ANGSTROM
PDB id
Binding data
Representative ligand
1ZGD
NAP
90% Homology Family
Leader:
1XKQ
CRYSTAL STRUCTURE OF SHORT-CHAIN DEHYDROGENASE/REDUCTASE OF
PDB id
Binding data
Representative ligand
1XKQ
NDP
90% Homology Family
Leader:
1WZU
CRYSTAL STRUCTURE OF QUINOLINATE SYNTHASE (NADA)
PDB id
Binding data
Representative ligand
1WZU
MLT
90% Homology Family
Leader:
1UX7
CARBOHYDRATE-BINDING MODULE CBM36 IN COMPLEX WITH CALCIUM
PDB id
Binding data
Representative ligand
1UX7
Kd ~ 1.0 mM
XYP-XYP-XYP
90% Homology Family
Leader:
1UPT
STRUCTURE OF A COMPLEX OF THE GOLGIN-245 GRIP DOMAIN WITH
PDB id
Binding data
Representative ligand
1UPT
GTP
90% Homology Family
Leader:
1TU3
CRYSTAL STRUCTURE OF RAB5 COMPLEX WITH RABAPTIN5 C-TERMINAL
PDB id
Binding data
Representative ligand
1TU3
GNP
90% Homology Family
Leader:
1SS4
CRYSTAL STRUCTURE OF THE GLYOXALASE FAMILY PROTEIN APC24694
PDB id
Binding data
Representative ligand
1SS4
CIT
90% Homology Family
Leader:
1RVV
SYNTHASE/RIBOFLAVIN SYNTHASE COMPLEX OF BACILLUS SUBTILIS
PDB id
Binding data
Representative ligand
1RVV
INI
90% Homology Family
Leader:
1Q19
CARBAPENAM SYNTHETASE
PDB id
Binding data
Representative ligand
1Q19
SSC
90% Homology Family
Leader:
1NSA
THREE-DIMENSIONAL STRUCTURE OF PORCINE PROCARBOXYPEPTIDASE
B: A STRUCTURAL BASIS OF ITS INACTIVITY
PDB id
Binding data
Representative ligand
1NSA
BEN
90% Homology Family
Leader:
1JAY
STRUCTURE OF COENZYME F420H2:NADP+ OXIDOREDUCTASE
(FNO) WITH ITS SUBSTRATES BOUND
PDB id
Binding data
Representative ligand
1JAY
NAP
90% Homology Family
Leader:
1H65
CRYSTAL STRUCTURE OF PEA TOC34-A NOVEL GTPASE
OF THE CHLOROPLAST PROTEIN TRANSLOCON
PDB id
Binding data
Representative ligand
1H65
GDP
90% Homology Family
Leader:
1H3F
TYROSYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS
COMPLEXED WITH TYROSINOL
PDB id
Binding data
Representative ligand
1H3F
TYB
90% Homology Family
Leader:
1H0H
TUNGSTEN CONTAINING FORMATE DEHYDROGENASE FROM
DESULFOVIBRIO GIGAS
PDB id
Binding data
Representative ligand
1H0H
2MD
90% Homology Family
Leader:
1GXU
HYDROGENASE MATURATION PROTEIN HYPF "ACYLPHOSPHATASE
-LIKE" N-TERMINAL DOMAIN (HYPF-ACP) IN COMPLEX
WITH A SUBSTRATE. CRYSTAL GROWN IN THE PRESENCE
OF CARBAMOYLPHOSPHATE
PDB id
Binding data
Representative ligand
1GXU
CP
90% Homology Family
Leader:
1ECM
ATOMIC STRUCTURE OF THE BURIED CATALYTIC POCKET
OF ESCHERICHIA COLI CHORISMATE MUTASE
PDB id
Binding data
Representative ligand
1ECM
Kd = 2.8 uM
TSA
90% Homology Family
Leader:
1D5C
CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM RAB6
COMPLEXED WITH GDP
PDB id
Binding data
Representative ligand
1D5C
GDP
90% Homology Family
Leader:
1A59
COLD-ACTIVE CITRATE SYNTHASE
PDB id
Binding data
Representative ligand
1A59
COA