Receptor
PDB id Resolution Class Description Source Keywords
3GW1 2.36 Å EC: 3.-.-.- THE STRUCTURE OF THE CAULOBACTER CRESCENTUS CLPS PROTEASE AD PROTEIN IN COMPLEX WITH FGG TRIPEPTIDE CAULOBACTER VIBRIOIDES ADAPTOR PROTEIN-PEPTIDE COMPLEX PEPTIDE-BINDING PROTEIN PBINDING PROTEIN
Ref.: MOLECULAR BASIS OF SUBSTRATE SELECTION BY THE N-END ADAPTOR PROTEIN CLPS. PROC.NATL.ACAD.SCI.USA V. 106 8888 2009
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MG A:1;
Invalid;
none;
submit data
24.305 Mg [Mg+2...
PHE GLY GLY C:1;
D:1;
Valid;
Valid;
none;
none;
submit data
207.253 n/a O=C(N...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
3DNJ 1.15 Å EC: 3.-.-.- THE STRUCTURE OF THE CAULOBACTER CRESCENTUS CLPS PROTEASE AD PROTEIN IN COMPLEX WITH A N-END RULE PEPTIDE CAULOBACTER VIBRIOIDES ADAPTOR PROTEIN-PEPTIDE COMPLEX PEPTIDE BINDING PROTEIN
Ref.: THE MOLECULAR BASIS OF N-END RULE RECOGNITION. MOL.CELL V. 32 406 2008
Members (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 312 families.
1 3DNJ - TYR LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
2 3G1B - TRP LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
3 3GW1 - PHE GLY GLY n/a n/a
4 3G19 - LEU LEU LEU n/a n/a
5 3GQ1 - TRP LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
70% Homology Family (5)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 261 families.
1 3DNJ - TYR LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
2 3G1B - TRP LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
3 3GW1 - PHE GLY GLY n/a n/a
4 3G19 - LEU LEU LEU n/a n/a
5 3GQ1 - TRP LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
50% Homology Family (7)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 214 families.
1 3O2B - PHE ARG SER LYS GLY GLU GLU LEU PHE THR n/a n/a
2 2WA8 Kd = 3.8 uM PHE ARG SER LYS GLY GLU GLU LEU PHE THR n/a n/a
3 3DNJ - TYR LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
4 3G1B - TRP LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
5 3GW1 - PHE GLY GLY n/a n/a
6 3G19 - LEU LEU LEU n/a n/a
7 3GQ1 - TRP LEU PHE VAL GLN ARG ASP SER LYS GLU n/a n/a
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: PHE GLY GLY; Similar ligands found: 4
No: Ligand ECFP6 Tc MDL keys Tc
1 PHE GLY GLY 1 1
2 PHE ARG SER LYS GLY GLU GLU LEU PHE THR 0.423529 0.627451
3 ASP PHE THR CYS SER GLN ILE SER PRO 0.409836 0.72973
4 SER PHE ALA ASN GLY 0.405063 0.727273
Similar Ligands (3D)
Ligand no: 1; Ligand: PHE GLY GLY; Similar ligands found: 0
No: Ligand Similarity coefficient
Similar Binding Sites (Proteins are less than 50% similar to leader) APoc FAQ
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