Receptor
PDB id Resolution Class Description Source Keywords
1KLL 1.5 Å NON-ENZYME: BINDING MOLECULAR BASIS OF MITOMYCIN C RESICTANCE IN STREPTOMYCES: CRYSTAL STRUCTURES OF THE MRD PROTEIN WITH AND WITHOUT A D RUG DERIVATIVE STREPTOMYCES LAVENDULAE MITOMYCIN C ANTIBIOTIC RESISTANCE SAD ANOMALOUS DIFFRACTION CRYSTAL STRUCTURE DOMAIN SWAPPING P-STAKINGANTIMICROBIAL PROTEIN
Ref.: MOLECULAR BASIS OF MITOMYCIN C RESISTANCE IN STREPTOMYCES: STRUCTURE AND FUNCTION OF THE MRD PROTEIN. STRUCTURE V. 10 933 2002
Ligand
Ligand Chain:Residue Validity Ligand Warnings Binding Data NGL Viewer Molecular Weight (Da) Formula SMILES
MC A:9138;
 Valid;
 none;
 submit data
320.301 C14 H16 N4 O5 CC1=C...
View in 3D viewer
90% Homology Family
Leader
PDB id Resolution Class Description Source Keywords
2A4W 1.5 Å NON-ENZYME: BINDING CRYSTAL STRUCTURE OF MITOMYCIN C-BINDING PROTEIN COMPLEXED WITH COPPER(II)-BLEOMYCIN A2 STREPTOMYCES CAESPITOSUS ALFA/BETA PROTEIN MITOMYCIN C-BINDING PROTEIN COPPER(II)- BLEOMYCIN A2 STRUCTURAL GENOMICS NPPSFA NATIONAL PROJECTON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES ANTIMICROBIAL PROTEIN
Ref.: THE MITOMYCIN C (MMC)-BINDING PROTEIN FROM MMC-PRODUCING MICROORGANISMS PROTECTS FROM THE LETHAL EFFECT OF BLEOMYCIN: CRYSTALLOGRAPHIC ANALYSIS TO ELUCIDATE THE BINDING MODE OF THE ANTIBIOTIC TO THE PROTEIN J.MOL.BIOL. V. 360 398
Members (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 552 families.
1 2A4W - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
2 1KLL - MC C14 H16 N4 O5 CC1=C(C(=O....
3 2A4X - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
70% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 426 families.
1 2A4W - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
2 1KLL - MC C14 H16 N4 O5 CC1=C(C(=O....
3 2A4X - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
50% Homology Family (3)
No: PDB id Binding Data Representative ligand Formula Smiles
The Class containing this family consists of a total of 322 families.
1 2A4W - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
2 1KLL - MC C14 H16 N4 O5 CC1=C(C(=O....
3 2A4X - BLM C55 H85 N17 O21 S3 Cc1c(nc(nc....
Polypharmacology
Similar Ligands (2D)
Ligand no: 1; Ligand: MC; Similar ligands found: 1
No: Ligand ECFP6 Tc MDL keys Tc
1 MC 1 1
Similar Ligands (3D)
Ligand no: 1; Ligand: MC; Similar ligands found: 28
No: Ligand Similarity coefficient
1 AN1 0.9195
2 IQA 0.9137
3 HXP 0.9000
4 CLI 0.8949
5 NOM 0.8899
6 4E2 0.8898
7 4E3 0.8879
8 5JW 0.8877
9 UXH 0.8818
10 9KQ 0.8816
11 IAA 0.8806
12 761 0.8790
13 465 0.8783
14 TZ2 0.8721
15 L32 0.8715
16 MNX 0.8712
17 BHF 0.8684
18 IA7 0.8669
19 VAR 0.8650
20 K2C 0.8630
21 YGL 0.8628
22 4PX 0.8628
23 GRI 0.8614
24 M2N 0.8614
25 HC8 0.8601
26 IRG 0.8557
27 982 0.8550
28 36I 0.8522
Similar Binding Sites (Proteins are less than 50% similar to leader)
Pocket No.: 1; Query (leader) PDB : 2A4W; Ligand: BLM; Similar sites found with APoc: No similar binding sites found, or similarity not calculated due to duplicate pocket.
This union binding pocket(no: 1) in the query (biounit: 2a4w.bio1) has 29 residues
No: Leader PDB Ligand Sequence Similarity
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